RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PSD4Q8NDX1 1056 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 BPIFA2Q96DR5 249 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 OR2A14Q96R47 310 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 GDF15Q99988 308 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 CRB3Q9BUF7 120 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 LRRC61Q9BV99 259 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 CBLCQ9ULV8 474 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 PLD2O14939 933 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 KRT33AO76009 404 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 CELA2BP08218 269 aaPredicted RBP13.1□□□□□ -0.31
SCAF4-202ENST00000399804 FNTBP49356 437 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 EMP2P54851 167 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 FZD2Q14332 565 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF440Q8IYI8 595 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 C10orf111Q8N326 155 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 TOR1AIP2Q8NFQ8 470 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 SLC35A4Q96G79 324 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 COX4I2Q96KJ9 171 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 HOXD1Q9GZZ0 328 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 SRA1Q9HD15 236 aaKnown RBP13.1□□□□□ -0.31
SCAF4-202ENST00000399804 SRPK3Q9UPE1 567 aa13.1□□□□□ -0.31
SCAF4-202ENST00000399804 FAM183AA6NL82 134 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 ADORA3P0DMS8 318 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 EPHA2P29317 976 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 RNASE12Q5GAN4 147 aaKnown RBP13.09□□□□□ -0.31
SCAF4-202ENST00000399804 TCTN3Q6NUS6 607 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 UBE2J2Q8N2K1 259 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 FKBP10Q96AY3 582 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 CSF3RQ99062 836 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 ACOT13Q9NPJ3 140 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 SLC22A7Q9Y694 548 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 TMX2-CTNND1H3BSU7 103 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 RNF13O43567 381 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 KIAA0513O60268 411 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 ATE1O95260 518 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 MT-ND5P03915 603 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 CDK1P06493 297 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 CHRM4P08173 479 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 SYPP08247 313 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF791Q3KP31 576 aaPredicted RBP13.09□□□□□ -0.31
SCAF4-202ENST00000399804 IZUMO1Q8IYV9 350 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 ENTHD1Q8IYW4 607 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 GOT1L1Q8NHS2 421 aaPredicted RBP13.09□□□□□ -0.31
SCAF4-202ENST00000399804 TSEN15Q8WW01 171 aaKnown RBP13.09□□□□□ -0.31
SCAF4-202ENST00000399804 UCN3Q969E3 161 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 SLAMF7Q9NQ25 335 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 TAS2R7Q9NYW3 318 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 ASB4Q9Y574 426 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 OR2A25A4D2G3 310 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 UPK1AO00322 258 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 SYT5O00445 386 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 PGCP20142 388 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 PYCR1P32322 319 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 NR0B2Q15466 257 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 THEM6Q8WUY1 208 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 TMEM234Q8WY98 164 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 MBOAT4Q96T53 435 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 GNG8Q9UK08 70 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 DOCK4Q8N1I0 1966 aa13.09□□□□□ -0.31
SCAF4-202ENST00000399804 PPP1R3DO95685 299 aa13.08□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF12P17014 697 aa13.08□□□□□ -0.31
SCAF4-202ENST00000399804 EDNRAP25101 427 aa13.08□□□□□ -0.31
SCAF4-202ENST00000399804 FAM69BQ5VUD6 431 aa13.08□□□□□ -0.31
SCAF4-202ENST00000399804 DNAJC22Q8N4W6 341 aa13.08□□□□□ -0.31
SCAF4-202ENST00000399804 ZNF676Q8N7Q3 588 aa13.08□□□□□ -0.31
SCAF4-202ENST00000399804 NAT6Q93015 286 aa13.08□□□□□ -0.31
SCAF4-202ENST00000399804 OR52D1Q9H346 318 aa13.08□□□□□ -0.31
SCAF4-202ENST00000399804 CACNA1IQ9P0X4 2223 aa13.08□□□□□ -0.31
SCAF4-202ENST00000399804 C19orf53Q9UNZ5 99 aaPredicted RBP13.08□□□□□ -0.31
SCAF4-202ENST00000399804 NYNRINQ9P2P1 1898 aaKnown RBP13.08□□□□□ -0.32
SCAF4-202ENST00000399804 SH3PXD2BA1X283 911 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 KRBA1A5PL33 1030 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 LINC00271P0C7V0 271 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 KLHL17Q6TDP4 642 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 KLBQ86Z14 1044 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 COQ7Q99807 217 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 OR10A5Q9H207 317 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 CENPMQ9NSP4 180 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 OR2W5A6NFC9 320 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 H3BSH0 61 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 PRODHO43272 600 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 LGI1O95970 557 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 FUT1P19526 365 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 CD1CP29017 333 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 ZP2Q05996 745 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 TSPAN31Q12999 210 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 ILKQ13418 452 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 GARNL3Q5VVW2 1013 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 C22orf42Q6IC83 251 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 SPATC1Q76KD6 591 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 C7orf57Q8NEG2 295 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 DNAJA4Q8WW22 397 aaPredicted RBP13.08□□□□□ -0.32
SCAF4-202ENST00000399804 C11orf24Q96F05 449 aaPredicted RBP13.08□□□□□ -0.32
SCAF4-202ENST00000399804 SENP5Q96HI0 755 aaPredicted RBP13.08□□□□□ -0.32
SCAF4-202ENST00000399804 SDF2Q99470 211 aa13.08□□□□□ -0.32
SCAF4-202ENST00000399804 SPRTNQ9H040 489 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms