RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 NRG1Q02297 640 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 PLD5Q8N7P1 536 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 OR6F1Q8NGZ6 308 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 STT3BQ8TCJ2 826 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 GPX8Q8TED1 209 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 WDR61Q9GZS3 305 aaKnown RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 NR2E3Q9Y5X4 410 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SOX21Q9Y651 276 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SYT7O43581 403 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 OR2F2O95006 317 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 GLRA2P23416 452 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 NSG1P42857 185 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC14A1Q13336 389 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ANKRD23Q86SG2 305 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 PDGFDQ9GZP0 370 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 OSGEPQ9NPF4 335 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 CEMIPQ8WUJ3 1361 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM170BA6NMN3 283 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM155AB1AL88 458 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 MT-ND1P03886 318 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ACSM4P0C7M7 580 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 NHLH1Q02575 133 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 NHLH2Q02577 135 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 PMS2P3Q13401 168 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF551Q7Z340 670 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 OR2A1Q8NGT9 310 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SMOXQ9NWM0 555 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 TMX2Q9Y320 296 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 VSTM2BA6NLU5 285 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 RBMS1P29558 406 aaKnown RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 APLNRP35414 380 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 EMP1P54849 157 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 KIAA0141Q14154 515 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ALX1Q15699 326 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ADIPOQQ15848 244 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SIAH1Q8IUQ4 282 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 PXYLP1Q8TE99 480 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 TSSK6Q9BXA6 273 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 RNASEH2AO75792 299 aaKnown RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 GDI1P31150 447 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SCNN1AP37088 669 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SEZ6Q53EL9 994 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 RNLSQ5VYX0 342 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 HBMQ6B0K9 141 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC26A9Q7LBE3 791 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 MENTQ9BUN1 341 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 GREM2Q9H772 168 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 NPAP1Q9NZP6 1156 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 CD63P08962 238 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SDHBP21912 280 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ADORA1P30542 326 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 NR0B1P51843 470 aaKnown RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 DCLRE1AQ6PJP8 1040 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 C6orf201Q7Z4U5 140 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 EDEM1Q92611 657 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF668Q96K58 619 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 LRR1Q96L50 414 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF395Q9H8N7 513 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SSU72Q9NP77 194 aaKnown RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF701M0R085 212 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 M0R1X1 148 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 TMEM11P17152 192 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 FPR1P21462 350 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 GPR22Q99680 433 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 OSBPL2Q9H1P3 480 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 COQ10BQ9H8M1 238 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 DUSP10Q9Y6W6 482 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 OR2J3O76001 311 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 POLR2CP19387 275 aaPredicted RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 GGT5P36269 586 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 RAB9AP51151 201 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FRMPD2BQ6IN97 320 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 AKR7LQ8NHP1 331 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 MARCH5Q9NX47 278 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 INO80Q9ULG1 1556 aaPredicted RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SIGLEC16A6NMB1 481 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 EPOP01588 193 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SYN1P17600 705 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 HOXA4Q00056 320 aaPredicted RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 GAB4Q2WGN9 574 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM169BQ8N8A8 192 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 EBF3Q9H4W6 596 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 NOCTQ9UK39 431 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 ANKRD31Q8N7Z5 1873 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FANCAO15360 1455 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SERTM2A0A1B0GWG4 89 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 HSBP1O75506 76 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 CST2P09228 141 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SPP2Q13103 211 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SBK1Q52WX2 424 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 HSD17B13Q7Z5P4 300 aaPredicted RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 SYT14Q8NB59 555 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 RBM15BQ8NDT2 890 aaKnown RBP8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 DDIT4LQ96D03 193 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 P2RY13Q9BPV8 354 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 MCOLN1Q9GZU1 580 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 PREBQ9HCU5 417 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 FBXO5Q9UKT4 447 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 ANHXE9PGG2 379 aa8.16□□□□□ -1.1
CACNA1C-220ENST00000399655 DNAL4O96015 105 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms