RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FADDQ13158 208 aa23.22■■□□□ 1.31
U2AF1-203ENST00000398137 SYPL1Q16563 259 aa23.22■■□□□ 1.31
U2AF1-203ENST00000398137 GPAT3Q53EU6 434 aa23.22■■□□□ 1.31
U2AF1-203ENST00000398137 SPPL2CQ8IUH8 684 aa23.22■■□□□ 1.31
U2AF1-203ENST00000398137 FAM98AQ8NCA5 519 aaKnown RBP23.22■■□□□ 1.31
U2AF1-203ENST00000398137 GID8Q9NWU2 228 aa23.22■■□□□ 1.31
U2AF1-203ENST00000398137 TUBA8Q9NY65 449 aaPredicted RBP23.22■■□□□ 1.31
U2AF1-203ENST00000398137 ANKRD33BA6NCL7 494 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 SCO2O43819 266 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 PTGDSP41222 190 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 NUDT2P50583 147 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 HPCAP84074 193 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 RBPJQ06330 500 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 FLYWCH1Q4VC44 716 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 TBCELQ5QJ74 424 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 TMEM81Q6P7N7 255 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 OR4C3Q8NH37 302 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 RNF138Q8WVD3 245 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 THUMPD3Q9BV44 507 aaKnown RBP23.21■■□□□ 1.31
U2AF1-203ENST00000398137 ANGPTL4Q9BY76 406 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 ZNF350Q9GZX5 532 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 P2RX2Q9UBL9 471 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 TAGLN3Q9UI15 199 aa23.21■■□□□ 1.31
U2AF1-203ENST00000398137 C2orf72A6NCS6 295 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 FADS1O60427 444 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 TNFRSF21O75509 655 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 STX11O75558 287 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 H6PDO95479 791 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 NPPAP01160 153 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 BCHEP06276 602 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 NR2F1P10589 423 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 ZNF24P17028 368 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 GPX2P18283 190 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 LCN1P31025 176 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 CDSNQ15517 529 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 RABL3Q5HYI8 236 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 GCNT6Q5T4J0 391 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 NANOGP8Q6NSW7 305 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 NCCRP1Q6ZVX7 275 aaPredicted RBP23.2■■□□□ 1.3
U2AF1-203ENST00000398137 MRGPRGQ86SM5 289 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 POGLUT1Q8NBL1 392 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 JSRP1Q96MG2 331 aaPredicted RBP23.2■■□□□ 1.3
U2AF1-203ENST00000398137 NANOGQ9H9S0 305 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 EFCAB1Q9HAE3 211 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 ABCG2Q9UNQ0 655 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 LIPT1Q9Y234 373 aa23.2■■□□□ 1.3
U2AF1-203ENST00000398137 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.2■■□□□ 1.3
U2AF1-203ENST00000398137 FCMRO60667 390 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 OXSR1O95747 527 aaPredicted RBP23.19■■□□□ 1.3
U2AF1-203ENST00000398137 CHRM4P08173 479 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 BMP2P12643 396 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 PRF1P14222 555 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 MASP1P48740 699 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 RNF144AP50876 292 aaPredicted RBP23.19■■□□□ 1.3
U2AF1-203ENST00000398137 PLGLB1Q02325 96 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 FOXO1Q12778 655 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 SNTA1Q13424 505 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 ART3Q13508 389 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 GPR68Q15743 365 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 MAPK11Q15759 364 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 SP5Q6BEB4 398 aaPredicted RBP23.19■■□□□ 1.3
U2AF1-203ENST00000398137 SLC30A6Q6NXT4 461 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 FRRS1Q6ZNA5 592 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 LURAP1LQ8IV03 231 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 ZFP62Q8NB50 900 aaPredicted RBP23.19■■□□□ 1.3
U2AF1-203ENST00000398137 MAL2Q969L2 176 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 ZNF597Q96LX8 424 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 TRNT1Q96Q11 434 aaKnown RBP23.19■■□□□ 1.3
U2AF1-203ENST00000398137 TBL1XR1Q9BZK7 514 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 A4GALTQ9NPC4 353 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 UBQLN4Q9NRR5 601 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 THUMPD1Q9NXG2 353 aaKnown RBP23.19■■□□□ 1.3
U2AF1-203ENST00000398137 MKLN1Q9UL63 735 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 WDR45Q9Y484 360 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 HRH3Q9Y5N1 445 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 WIF1Q9Y5W5 379 aa23.19■■□□□ 1.3
U2AF1-203ENST00000398137 LRRC3CA6NJW4 275 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 C17orf51A8MQB3 221 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 PRSS44E7EML9 344 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 KIAA0513O60268 411 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 TRIM3O75382 744 aaPredicted RBP23.18■■□□□ 1.3
U2AF1-203ENST00000398137 SNX4O95219 450 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 NGFRP08138 427 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 TBXA2RP21731 343 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 TYW3Q6IPR3 259 aaKnown RBP23.18■■□□□ 1.3
U2AF1-203ENST00000398137 APOOLQ6UXV4 268 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 MARCH3Q86UD3 253 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 ZNF808Q8N4W9 903 aaPredicted RBP23.18■■□□□ 1.3
U2AF1-203ENST00000398137 GATSQ8NAP1 163 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 OR8J3Q8NGG0 315 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 SLC38A5Q8WUX1 472 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 NTNG2Q96CW9 530 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 RTN4RQ9BZR6 473 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 RUBCNLQ9H714 662 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 POLE3Q9NRF9 147 aa23.18■■□□□ 1.3
U2AF1-203ENST00000398137 SUCOQ9UBS9 1254 aaKnown RBP23.18■■□□□ 1.3
U2AF1-203ENST00000398137 BOKQ9UMX3 212 aaPredicted RBP23.18■■□□□ 1.3
U2AF1-203ENST00000398137 CENPVL1A0A0U1RR11 272 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 TMEM247A6NEH6 219 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 FAM166BA8MTA8 275 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms