RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 ALKBH6Q3KRA9 238 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 VPS26BQ4G0F5 336 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 OXLD1Q5BKU9 147 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF678Q5SXM1 525 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 PRAMEF13Q5VWM6 474 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 TANGO2Q6ICL3 276 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CREB3L2Q70SY1 520 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 MFSD6LQ8IWD5 586 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CFAP206Q8IYR0 622 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 LRRC58Q96CX6 371 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 APIPQ96GX9 242 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 MRGPRX1Q96LB2 322 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 GSTO2Q9H4Y5 243 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CSNK1G1Q9HCP0 422 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 SCUBE2Q9NQ36 999 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 FBXL3Q9UKT7 428 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 TBC1D24Q9ULP9 559 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 OAZ3Q9UMX2 235 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 DYRK1BQ9Y463 629 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 A0A1B0GUH1 482 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 MAGEB17A8MXT2 336 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 OR10H2O60403 315 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 MATN4O95460 622 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 KLKB1P03952 638 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 HLA-DQB2P05538 268 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 SMIM10L2AP0DMW4 78 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 SMIM10L2BP0DMW5 78 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 HGFP14210 728 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 GPX3P22352 226 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ERP29P30040 261 aaKnown RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ADRA1AP35348 466 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 IDH3GP51553 393 aaPredicted RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 PLA2G16P53816 162 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 NEDD8Q15843 81 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 RAB41Q5JT25 222 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ZNF687Q8N1G0 1237 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 SUN3Q8TAQ9 357 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 DNAJB3Q8WWF6 145 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CDS1Q92903 461 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 MISP3Q96FF7 219 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 FAM110AQ9BQ89 295 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 MFSD1Q9H3U5 465 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 GEMIN7Q9H840 131 aaKnown RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 HMG20AQ9NP66 347 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 FZD3Q9NPG1 666 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 PTGFRNQ9P2B2 879 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 EBF1Q9UH73 591 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 KCNG2Q9UJ96 466 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 PPP1R3CQ9UQK1 317 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 KIAA1671Q9BY89 1806 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 A0A1W2PQL4 384 aaPredicted RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 MYBPHLA2RUH7 354 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 EI24O14681 340 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CPNE3O75131 537 aaKnown RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 RBMXL2O75526 392 aaKnown RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ADAP1O75689 374 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 GLP2RO95838 553 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ADAP00813 363 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 C9P02748 559 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 FMO3P31513 532 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CEACAM3P40198 252 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 EEFSECP57772 596 aaKnown RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC17A1Q14916 467 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 SGCBQ16585 318 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 RNASE10Q5GAN6 216 aaKnown RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 C9orf64Q5T6V5 341 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 BROXQ5VW32 411 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CD300LGQ6UXG3 332 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 PROSER1Q86XN7 944 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CILP2Q8IUL8 1156 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 RBFAQ8N0V3 343 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 PARP8Q8N3A8 854 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 C12orf76Q8N812 135 aaPredicted RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 GPBAR1Q8TDU6 330 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 GPX8Q8TED1 209 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 FAM222BQ8WU58 562 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 GCDHQ92947 438 aaPredicted RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 CCDC74AQ96AQ1 378 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 MRGPRX2Q96LB1 330 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 MCCC1Q96RQ3 725 aaPredicted RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 SLC39A8Q9C0K1 460 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 RNF39Q9H2S5 420 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ABHD16BQ9H3Z7 469 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 SEBOXQ9HB31 216 aaPredicted RBP6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 KMT2EQ8IZD2 1858 aa6.18□□□□□ -1.42
TM9SF4-202ENST00000398022 ANKRD12Q6UB98 2062 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 A0A1B0GVM2 712 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PIP5K1BO14986 540 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 UGT2B11O75310 529 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 INHAP05111 366 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 H2AFB1P0C5Y9 115 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 TSPAN8P19075 237 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PAICSP22234 425 aaKnown RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 TMEM33P57088 247 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 TAB1Q15750 504 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 UNC50Q53HI1 259 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 XKR6Q5GH73 641 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 ATAD3CQ5T2N8 411 aa6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 C8orf82Q6P1X6 216 aaPredicted RBP6.17□□□□□ -1.42
TM9SF4-202ENST00000398022 PAQR3Q6TCH7 311 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms