RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 OR4Q3Q8NH05 313 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ASB15Q8WXK1 588 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 WDR92Q96MX6 357 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC38A2Q96QD8 506 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CDCA3Q99618 268 aaPredicted RBP17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TM9SF2Q99805 663 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ZNF443Q9Y2A4 671 aaPredicted RBP17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LDB3O75112 727 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 UGT2B7P16662 529 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CPEP16870 476 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 NDUFS1P28331 727 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SOX18P35713 384 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 HTR3AP46098 478 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 RPS25P62851 125 aaKnown RBP17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 DLX2Q07687 328 aaPredicted RBP17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 RAB40BQ12829 278 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 C3orf38Q5JPI3 329 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TYW3Q6IPR3 259 aaKnown RBP17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CDC73Q6P1J9 531 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 KIAA1324Q6UXG2 1013 aaKnown RBP17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SFTPA2Q8IWL1 248 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC41A3Q96GZ6 507 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MUTYHQ9UIF7 546 aa17.11■□□□□ 0.33
CHRFAM7A-202ENST00000397827 GON4LQ3T8J9 2241 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 FANCMQ8IYD8 2048 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 OR6C74A6NCV1 312 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 DUXAA6NLW8 204 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 PVRP15151 417 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 AZGP1P25311 298 aaKnown RBP17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 KIAA1024LP59773 190 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 GPR18Q14330 331 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 FCRL6Q6DN72 434 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LAPTM4BQ86VI4 370 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 NT5CQ8TCD5 201 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ACOT11Q8WXI4 607 aaPredicted RBP17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 C1GALT1C1Q96EU7 318 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MAT2BQ9NZL9 334 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 DAPP1Q9UN19 280 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC2A10O95528 541 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CTHP32929 405 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 DBPQ10586 325 aaPredicted RBP17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ZNF836Q6ZNA1 936 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MRGPREQ86SM8 312 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SYT14Q8NB59 555 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 OR4F15Q8NGB8 312 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC22A18Q96BI1 424 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TM4SF19Q96DZ7 209 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ARSGQ96EG1 525 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ST6GAL2Q96JF0 529 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MRGPRX1Q96LB2 322 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ADAP2Q9NPF8 381 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 ZMAT5Q9UDW3 170 aaKnown RBP17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SLC7A7Q9UM01 511 aa17.1■□□□□ 0.33
CHRFAM7A-202ENST00000397827 RUNX1T1Q06455 604 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MINDY4Q4G0A6 757 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 GJD3Q8N144 294 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 OR2L13Q8N349 312 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 BBS1Q8NFJ9 593 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TTC9Q92623 222 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SERINC2Q96SA4 455 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 NCKAP1Q9Y2A7 1128 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 V9GYH0 126 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 VCANP13611 3396 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CDC42EP2O14613 210 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 B3GALT2O43825 422 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SNX4O95219 450 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LIMS3P0CW19 117 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LIMS4P0CW20 117 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SMIM10L1P0DMW3 83 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 NUDT1P36639 197 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CDH11P55287 796 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TAGLNQ01995 201 aaKnown RBP17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 HNRNPA0Q13151 305 aaKnown RBP17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LARS2Q15031 903 aaKnown RBP17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 YIF1BQ5BJH7 314 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 FIGLAQ6QHK4 219 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 TMPRSS11AQ6ZMR5 421 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 FRMD1Q8N878 549 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 SMIM10Q96HG1 83 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MTHFD2LQ9H903 347 aaPredicted RBP17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 FGF20Q9NP95 211 aaPredicted RBP17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MRPS18AQ9NVS2 196 aaKnown RBP17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 FBXO34Q9NWN3 711 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 CSNK1G3Q9Y6M4 447 aa17.09■□□□□ 0.33
CHRFAM7A-202ENST00000397827 NPIPA5A0A0B4J1W7 369 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 LRRC72A6NJI9 287 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 NPIPA7E9PJI5 369 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 H3BUI4 141 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 GKN3PP0CG01 181 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 NPIPA8P0DM63 369 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 PRG2P13727 222 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 DEFA1P59665 94 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 DEFA3P59666 94 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 PSPHP78330 225 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 BNC1Q01954 994 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MADCAM1Q13477 382 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 KIR2DS3Q14952 304 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 MAPK14Q16539 360 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 DECR1Q16698 335 aa17.08■□□□□ 0.33
CHRFAM7A-202ENST00000397827 NXNL2Q5VZ03 156 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms