RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 KCTD4Q8WVF5 259 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 ATP6V1E2Q96A05 226 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 TRIM31Q9BZY9 425 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 BHLHE41Q9C0J9 482 aaPredicted RBP8.36□□□□□ -1.07
NEDD9-203ENST00000397378 BRF2Q9HAW0 419 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 FBXO34Q9NWN3 711 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 CISD1Q9NZ45 108 aaKnown RBP8.36□□□□□ -1.07
NEDD9-203ENST00000397378 XPR1Q9UBH6 696 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 METRNQ9UJH8 293 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 SLC12A4Q9UP95 1085 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 PCDHGB1Q9Y5G3 927 aa8.36□□□□□ -1.07
NEDD9-203ENST00000397378 DPRXA6NFQ7 191 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 RGS9O75916 674 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-203ENST00000397378 KLHL2O95198 593 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 SYNGR4O95473 234 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 IL33O95760 270 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 C2P06681 752 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 CSF3P09919 207 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 TCP1P17987 556 aaKnown RBP8.35□□□□□ -1.07
NEDD9-203ENST00000397378 IL32P24001 234 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 CLK3P49761 638 aaKnown RBP8.35□□□□□ -1.07
NEDD9-203ENST00000397378 C21orf58P58505 322 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 RAC1P63000 192 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 IRF9Q00978 393 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 BSPH1Q075Z2 132 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 C17orf67Q0P5P2 114 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 AWAT1Q58HT5 328 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 LGSNQ5TDP6 509 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 MFSD12Q6NUT3 480 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 ESPNLQ6ZVH7 1005 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 GALNT10Q86SR1 603 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 ATG4DQ86TL0 474 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-203ENST00000397378 MARCH3Q86UD3 253 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 KLHL7Q8IXQ5 586 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 MTBPQ96DY7 904 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 GPR78Q96P69 363 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 HBEGFQ99075 208 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 PRR14Q9BWN1 585 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 POTEKPQ9BYX7 375 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 SHCBP1LQ9BZQ2 653 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 ELOVL6Q9H5J4 265 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 C12orf49Q9H741 205 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 HHATLQ9HCP6 504 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 PFDN4Q9NQP4 134 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 FARSBQ9NSD9 589 aaKnown RBP8.35□□□□□ -1.07
NEDD9-203ENST00000397378 NMRK1Q9NWW6 199 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 FLRT3Q9NZU0 649 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 CPSF2Q9P2I0 782 aaKnown RBP8.35□□□□□ -1.07
NEDD9-203ENST00000397378 PCTPQ9UKL6 214 aa8.35□□□□□ -1.07
NEDD9-203ENST00000397378 A0A087WV62 115 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 A0A087WZY1 265 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 C7orf72A4D263 438 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 SHISA9B4DS77 424 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 SHISA8B8ZZ34 492 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 STX16-NPEPL1H3BU86 382 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 STX16O14662 325 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 CXCL13O43927 109 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 COQ9O75208 318 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 SLITRK5O94991 958 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 ESRRBO95718 433 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 PDYNP01213 254 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 PABPC4LP0CB38 370 aaKnown RBP8.34□□□□□ -1.07
NEDD9-203ENST00000397378 MPIP34949 423 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 CDH11P55287 796 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 PRR5P85299 388 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 NAB1Q13506 487 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 P2RY6Q15077 328 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 DECR1Q16698 335 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 TECRLQ5HYJ1 363 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 KLC3Q6P597 504 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 SHISA2Q6UWI4 295 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 TFAP2EQ6VUC0 442 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 SSX8Q7RTT4 187 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 FAM9CQ8IZT9 166 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 ZNF619Q8N2I2 560 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 GTPBP8Q8N3Z3 284 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-203ENST00000397378 C1orf52Q8N6N3 182 aaKnown RBP8.34□□□□□ -1.07
NEDD9-203ENST00000397378 PTGR2Q8N8N7 351 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-203ENST00000397378 OR7G2Q8NG99 324 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 OR4F6Q8NGB9 312 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 OR2V1Q8NHB1 315 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 FAM216AQ8WUB2 273 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 SELENOMQ8WWX9 145 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 KISS1RQ969F8 398 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-203ENST00000397378 TBL1XR1Q9BZK7 514 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 GP6Q9HCN6 339 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 SLC35C2Q9NQQ7 365 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 GIMAP4Q9NUV9 329 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 TMEFF2Q9UIK5 374 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-203ENST00000397378 MCM8Q9UJA3 840 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 MRTO4Q9UKD2 239 aaKnown RBP8.34□□□□□ -1.07
NEDD9-203ENST00000397378 TMCO1Q9UM00 188 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 VDAC3Q9Y277 283 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 SNX24Q9Y343 169 aa8.34□□□□□ -1.07
NEDD9-203ENST00000397378 A0A0J9YW62 118 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 GOLGA8QA0A0J9YX86 632 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 ESYT3A0FGR9 886 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 GOLGA8OA6NCC3 632 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 GOLGA8NF8WBI6 632 aa8.33□□□□□ -1.08
NEDD9-203ENST00000397378 CCDC188H7C350 402 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms