RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 GIMAP5Q96F15 307 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 FUZQ9BT04 418 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 RLIMQ9NVW2 624 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 MAT2BQ9NZL9 334 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 IL17BQ9UHF5 180 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 FAM32AQ9Y421 112 aaKnown RBP13.81□□□□□ -0.2
CAPN3-207ENST00000397200 MRPS18BQ9Y676 258 aaKnown RBP13.81□□□□□ -0.2
CAPN3-207ENST00000397200 DSPPQ9NZW4 1301 aa13.81□□□□□ -0.2
CAPN3-207ENST00000397200 WBP4O75554 376 aaKnown RBP13.8□□□□□ -0.2
CAPN3-207ENST00000397200 SERPINB7O75635 380 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 HMGN2P05204 90 aaKnown RBP13.8□□□□□ -0.2
CAPN3-207ENST00000397200 CHRM4P08173 479 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 IFI6P09912 130 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 LIFP15018 202 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 OTX2P32243 289 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 MC3RP41968 323 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 PGDP52209 483 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 IL1RL1Q01638 556 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 MAP4K2Q12851 820 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 GNA13Q14344 377 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 CYP27C1Q4G0S4 372 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 COLEC12Q5KU26 742 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 TCTN3Q6NUS6 607 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 FAM111BQ6SJ93 734 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 VASH2Q86V25 355 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 KRT73Q86Y46 540 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 ENTHD1Q8IYW4 607 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 VWA5B2Q8N398 1253 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 DOK4Q8TEW6 326 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 PTPMT1Q8WUK0 201 aaPredicted RBP13.8□□□□□ -0.2
CAPN3-207ENST00000397200 C12orf43Q96C57 262 aaKnown RBP13.8□□□□□ -0.2
CAPN3-207ENST00000397200 C8orf44Q96CB5 159 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 COL21A1Q96P44 957 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 NODALQ96S42 347 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 NIPSNAP1Q9BPW8 284 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 SLC24A3Q9HC58 644 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 ENOPH1Q9UHY7 261 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 TPRKBQ9Y3C4 175 aa13.8□□□□□ -0.2
CAPN3-207ENST00000397200 LOC102723996A0A087X1L8 192 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 IGHV3-20A0A0C4DH32 117 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 A0A0G2JPF8 293 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 HNRNPCL2B2RXH8 293 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 HNRNPCL3B7ZW38 293 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 H3BMQ9 156 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 CCNB2O95067 398 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 OXSR1O95747 527 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 CT62P0C5K7 136 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 HNRNPCL4P0DMR1 293 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 NR2F1P10589 423 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 TMBIM6P55061 237 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 CSNK2BP67870 215 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 CLN3Q13286 438 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 ZNF267Q14586 743 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 LASP1Q14847 261 aaKnown RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 PAPD4Q6PIY7 484 aaKnown RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 SZRD1Q7Z422 152 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 RAB43Q86YS6 212 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 ZNF248Q8NDW4 579 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 BPIFB6Q8NFQ5 453 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 OR7G2Q8NG99 324 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 OR9Q2Q8NGE9 314 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 OR4D11Q8NGI4 311 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 KCNE4Q8WWG9 221 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 NACC2Q96BF6 587 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 ART5Q96L15 291 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 COG8Q96MW5 612 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 LPAR4Q99677 370 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 MESP1Q9BRJ9 268 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 CNPPD1Q9BV87 410 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 SPATA5L1Q9BVQ7 753 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 C3orf14Q9HBI5 128 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 CCNB1IP1Q9NPC3 277 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 PLCXD1Q9NUJ7 323 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 PTGFRNQ9P2B2 879 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 SEC14L3Q9UDX4 400 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 HS3ST3B1Q9Y662 390 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 AKAP13Q12802 2813 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 A0A087WV62 115 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 SAGE2PA6NJ88 616 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 XPNPEP2O43895 674 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 PLOD3O60568 738 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 EPPINO95925 133 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 ADAP00813 363 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 FUT4P22083 530 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 ELAVL4P26378 380 aaKnown RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 ACVR2AP27037 513 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 KRT20P35900 424 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 MGAT2Q10469 447 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 DYNC1I2Q13409 638 aaKnown RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 TRMT12Q53H54 448 aaKnown RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 DHRS4L2Q6PKH6 230 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 PPP1R32Q7Z5V6 425 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 COMTD1Q86VU5 262 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 SLC44A2Q8IWA5 706 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 NUP43Q8NFH3 380 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 OR52J3Q8NH60 311 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 PHF10Q8WUB8 498 aaKnown RBP13.79□□□□□ -0.2
CAPN3-207ENST00000397200 XAGE5Q8WWM1 108 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 CTHRC1Q96CG8 243 aa13.79□□□□□ -0.2
CAPN3-207ENST00000397200 ALPK1Q96QP1 1244 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms