RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 C1orf159Q96HA4 380 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 RADILQ96JH8 1075 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 DHRS9Q9BPW9 319 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 CHODLQ9H9P2 273 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 BRF2Q9HAW0 419 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 GP6Q9HCN6 339 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 PFDN4Q9NQP4 134 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 KLHL13Q9P2N7 655 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 VDAC3Q9Y277 283 aa7.47□□□□□ -1.21
SCFD1-202ENST00000396629 PLCE1Q9P212 2302 aa7.46□□□□□ -1.21
SCFD1-202ENST00000396629 LOC100289279A0A1B0GTE1 492 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 TCRBV9S1A1TA0A576 114 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF814B7Z6K7 855 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 ABCD4O14678 606 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 TCF21O43680 179 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 COQ9O75208 318 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF155Q12901 538 aaPredicted RBP7.46□□□□□ -1.22
SCFD1-202ENST00000396629 CSTF3Q12996 717 aaKnown RBP7.46□□□□□ -1.22
SCFD1-202ENST00000396629 ACAP2Q15057 778 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 RNPS1Q15287 305 aaKnown RBP7.46□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF239Q16600 458 aaKnown RBP7.46□□□□□ -1.22
SCFD1-202ENST00000396629 BHLHB9Q6PI77 547 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 CCDC91Q7Z6B0 441 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 HTRA1Q92743 480 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 ZBTB8AQ96BR9 441 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 PRR14Q9BWN1 585 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 EML4Q9HC35 981 aaKnown RBP7.46□□□□□ -1.22
SCFD1-202ENST00000396629 FARSBQ9NSD9 589 aaKnown RBP7.46□□□□□ -1.22
SCFD1-202ENST00000396629 NPAP1Q9NZP6 1156 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 MRTO4Q9UKD2 239 aaKnown RBP7.46□□□□□ -1.22
SCFD1-202ENST00000396629 SVEP1Q4LDE5 3571 aa7.46□□□□□ -1.22
SCFD1-202ENST00000396629 A0A087WV62 115 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 GOLGA6L6A8MZA4 724 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 PGM3O95394 542 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 UTS2O95399 124 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 PDYNP01213 254 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 EGR1P18146 543 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 EFNA4P52798 201 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 CARD18P57730 90 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 DR1Q01658 176 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 FAM83EQ2M2I3 478 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 PLPPR5Q32ZL2 321 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 GRAMD1BQ3KR37 738 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 SGO1Q5FBB7 561 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 SH2D4BQ5SQS7 431 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 Q6ZT83 130 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 TRABD2AQ86V40 505 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 FAM9CQ8IZT9 166 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 FBXL14Q8N1E6 418 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 MUC15Q8N387 334 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 C1orf52Q8N6N3 182 aaKnown RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 POC1BQ8TC44 478 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 ABHD3Q8WU67 409 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 EXOSC8Q96B26 276 aaKnown RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 KLHL15Q96M94 604 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 RNF145Q96MT1 663 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 GPR78Q96P69 363 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 TBL1XR1Q9BZK7 514 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 ELOVL6Q9H5J4 265 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 HHATLQ9HCP6 504 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 SLC35C2Q9NQQ7 365 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 CPSF2Q9P2I0 782 aaKnown RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 MCM8Q9UJA3 840 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 MGAT4BQ9UQ53 548 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 PPP2R2CQ9Y2T4 447 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 HEATR1Q9H583 2144 aaKnown RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 A0A1W2PRB8 838 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 GMFGO60234 142 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 PSMG1O95456 288 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 ESRRBO95718 433 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 YES1P07947 543 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 IL3P08700 152 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 GSTA2P09210 222 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 ITGA2P17301 1181 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 MPIP34949 423 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 ARL1P40616 181 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 OR3A2P47893 321 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 PSMD4P55036 377 aaKnown RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 MANFP55145 182 aaKnown RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 TIMM23BQ5SRD1 257 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 C3orf62Q6ZUJ4 267 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 P2RY8Q86VZ1 359 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 OR4F6Q8NGB9 312 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 ACTRT2Q8TDY3 377 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 CPNE4Q96A23 557 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 MUCL1Q96DR8 90 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 NSUN5Q96P11 429 aaKnown RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 LMF2Q9BU23 707 aaKnown RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 SRXN1Q9BYN0 137 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 SHCBP1LQ9BZQ2 653 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 Q9N2J8 555 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 GIMAP4Q9NUV9 329 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 MED17Q9NVC6 651 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 NMRK1Q9NWW6 199 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 PCTPQ9UKL6 214 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 SNX12Q9UMY4 172 aa7.45□□□□□ -1.22
SCFD1-202ENST00000396629 C19orf53Q9UNZ5 99 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-202ENST00000396629 ARFGEF3Q5TH69 2177 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms