RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 OR6C76A6NM76 312 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 SYT7O43581 403 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 SLCO2B1O94956 709 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 DCTP40126 519 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 MPP2Q14168 576 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 PLAG1Q6DJT9 500 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 SNX29P2Q8IUI4 249 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 PM20D2Q8IYS1 436 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 C3orf58Q8NDZ4 430 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 OR5T2Q8NGG2 359 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 OR9A2Q8NGT5 310 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 SLC25A43Q8WUT9 341 aaPredicted RBP14.72□□□□□ -0.05
GNE-202ENST00000396594 ZNF480Q8WV37 535 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 TMEM203Q969S6 136 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 STACQ99469 402 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 MARCH7Q9H992 704 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 A4GALTQ9NPC4 353 aa14.72□□□□□ -0.05
GNE-202ENST00000396594 COL18A1P39060 1754 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 ARAP2Q8WZ64 1704 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 POLR2HP52434 150 aaKnown RBP14.71□□□□□ -0.05
GNE-202ENST00000396594 CTBSQ01459 385 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 SMAD4Q13485 552 aaKnown RBP14.71□□□□□ -0.05
GNE-202ENST00000396594 GRK1Q15835 563 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 KIAA1211LQ6NV74 962 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 OR2A12Q8NGT7 310 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 C12orf4Q9NQ89 552 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 KCNN3Q9UGI6 736 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 RAB40ALP0C0E4 278 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 PRKAR1BP31321 381 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 CCR7P32248 378 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 SLC35A1P78382 337 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 AKIRIN2Q53H80 203 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 SLC22A16Q86VW1 577 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 RAB40AQ8WXH6 277 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 PHOX2BQ99453 314 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 ACPTQ9BZG2 426 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 SLC39A1Q9NY26 324 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 RHCGQ9UBD6 479 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 NSG1A0A0A6YYJ2 146 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 LOC102723532A0A0G2JNH3 316 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 C12orf71A8MTZ7 269 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 PRKACGP22612 351 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 PPP5CP53041 499 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 CTSL3PQ5NE16 218 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 C1orf189Q5VU69 101 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 TMEM64Q6YI46 380 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 PBDC1Q9BVG4 233 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 ZNF334Q9HCZ1 680 aaPredicted RBP14.71□□□□□ -0.05
GNE-202ENST00000396594 PRSS16Q9NQE7 514 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 SLC7A7Q9UM01 511 aa14.71□□□□□ -0.05
GNE-202ENST00000396594 AGAP5A6NIR3 686 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 SLC43A1O75387 559 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 DIRAS1O95057 198 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 FUT1P19526 365 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 PRKACBP22694 351 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 GNRHRP30968 328 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 WNT7BP56706 349 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 RAB31Q13636 194 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 PDE7AQ13946 482 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 GSG1LQ6UXU4 331 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 CMTM1Q8IZ96 169 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 OR5H2Q8NGV7 314 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 TMEM163Q8TC26 289 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 MUL1Q969V5 352 aa14.71□□□□□ -0.06
GNE-202ENST00000396594 MYH4Q9Y623 1939 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 CAPN3P20807 821 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 NR0B1P51843 470 aaKnown RBP14.7□□□□□ -0.06
GNE-202ENST00000396594 S100A10P60903 97 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 PAQR9Q6ZVX9 377 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 SYT14Q8NB59 555 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 SPPL3Q8TCT6 385 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 SORT1Q99523 831 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 OR2B2Q9GZK3 357 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 SYT4Q9H2B2 425 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 AGPAT4Q9NRZ5 378 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 PDHA2P29803 388 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 XCR1P46094 333 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 FIGNL1Q6PIW4 674 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 MRPL21Q7Z2W9 205 aaKnown RBP14.7□□□□□ -0.06
GNE-202ENST00000396594 ARFGAP1Q8N6T3 406 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 PCDHGA3Q9Y5H0 932 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 PAPPAQ13219 1627 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 RNF212BA8MTL3 300 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 SULT2B1O00204 365 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 GPR171O14626 319 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 SLC35E2P0CK97 266 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 HLA-FP30511 346 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 TSPAN31Q12999 210 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 TBCEQ15813 527 aaPredicted RBP14.7□□□□□ -0.06
GNE-202ENST00000396594 CLECL1Q8IZS7 167 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 Q8N402 240 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 OR5D14Q8NGL3 314 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 MTG2Q9H4K7 406 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 ZBTB20Q9HC78 741 aaPredicted RBP14.7□□□□□ -0.06
GNE-202ENST00000396594 ERVK-18Q9QC07 812 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 GIMAP2Q9UG22 337 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 B8ZZF3 427 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 P2RX6O15547 441 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 KIAA0513O60268 411 aa14.7□□□□□ -0.06
GNE-202ENST00000396594 PEX14O75381 377 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms