RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TSSK3Q96PN8 268 aa14.74□□□□□ -0.05
DDR1-229ENST00000396342 TACO1Q9BSH4 297 aaKnown RBP14.74□□□□□ -0.05
DDR1-229ENST00000396342 HOXD1Q9GZZ0 328 aa14.74□□□□□ -0.05
DDR1-229ENST00000396342 NGBQ9NPG2 151 aa14.74□□□□□ -0.05
DDR1-229ENST00000396342 ACSS1Q9NUB1 689 aaPredicted RBP14.74□□□□□ -0.05
DDR1-229ENST00000396342 FAF1Q9UNN5 650 aaPredicted RBP14.74□□□□□ -0.05
DDR1-229ENST00000396342 SNX8Q9Y5X2 465 aa14.74□□□□□ -0.05
DDR1-229ENST00000396342 IGLV3-32A0A0A0MS00 114 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 A0A1W2PPM1 405 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 ALG1L2C9J202 215 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 TRIM13O60858 407 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 PSMG1O95456 288 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 NGFRP08138 427 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 PRPH2P23942 346 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 CLDN20P56880 219 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 RPL38P63173 70 aaKnown RBP14.73□□□□□ -0.05
DDR1-229ENST00000396342 LTBQ06643 244 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 BEX5Q5H9J7 111 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 CPTPQ5TA50 214 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 CLEC6AQ6EIG7 209 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 BHLHB9Q6PI77 547 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 PLEKHM3Q6ZWE6 761 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 PPP3R2Q96LZ3 170 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 ITPR3Q14573 2671 aa14.73□□□□□ -0.05
DDR1-229ENST00000396342 GXYLT2A0PJZ3 443 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 GTPBP1O00178 669 aaKnown RBP14.72□□□□□ -0.05
DDR1-229ENST00000396342 NKX2-2O95096 273 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 FESP07332 822 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 TUBBP07437 444 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 FAM153BP0C7A2 387 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 LINC00032P0C843 101 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 SUCLG1P53597 346 aaKnown RBP14.72□□□□□ -0.05
DDR1-229ENST00000396342 CARD18P57730 90 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 RAC1P63000 192 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 POU6F2P78424 691 aaPredicted RBP14.72□□□□□ -0.05
DDR1-229ENST00000396342 IFFO1Q0D2I5 559 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.72□□□□□ -0.05
DDR1-229ENST00000396342 LSM12Q3MHD2 195 aaKnown RBP14.72□□□□□ -0.05
DDR1-229ENST00000396342 FAM153CQ494X1 144 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 TMEM201Q5SNT2 666 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 HBMQ6B0K9 141 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 FIGNL1Q6PIW4 674 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 ZNF474Q6S9Z5 364 aaPredicted RBP14.72□□□□□ -0.05
DDR1-229ENST00000396342 ESPNLQ6ZVH7 1005 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 EXOC3L1Q86VI1 746 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 TDRPQ86YL5 185 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 GTPBP8Q8N3Z3 284 aaPredicted RBP14.72□□□□□ -0.05
DDR1-229ENST00000396342 OR10D3Q8NH80 312 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 OR2V1Q8NHB1 315 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 B4GALNT2Q8NHY0 566 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.72□□□□□ -0.05
DDR1-229ENST00000396342 TMEM171Q8WVE6 324 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.72□□□□□ -0.05
DDR1-229ENST00000396342 GSX1Q9H4S2 264 aaPredicted RBP14.72□□□□□ -0.05
DDR1-229ENST00000396342 CXorf56Q9H5V9 222 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 ZCCHC3Q9NUD5 404 aaKnown RBP14.72□□□□□ -0.05
DDR1-229ENST00000396342 EMCNQ9ULC0 261 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 PRRC2AP48634 2157 aaKnown RBP14.72□□□□□ -0.05
DDR1-229ENST00000396342 CELSR1Q9NYQ6 3014 aa14.72□□□□□ -0.05
DDR1-229ENST00000396342 TLDC2A0PJX2 215 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 H0YC42 278 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 TBX19O60806 448 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 OXSR1O95747 527 aaPredicted RBP14.71□□□□□ -0.05
DDR1-229ENST00000396342 TPD52P55327 224 aaPredicted RBP14.71□□□□□ -0.05
DDR1-229ENST00000396342 SLC18A2Q05940 514 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 ATP6AP1LQ52LC2 224 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 ANKRD34AQ69YU3 496 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 ANKRD26P1Q6NSI1 321 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 PRSS57Q6UWY2 283 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 GATSQ8NAP1 163 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 FBXO30Q8TB52 745 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 ADAMTS15Q8TE58 950 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 CIDECQ96AQ7 238 aaPredicted RBP14.71□□□□□ -0.05
DDR1-229ENST00000396342 SH3YL1Q96HL8 342 aaPredicted RBP14.71□□□□□ -0.05
DDR1-229ENST00000396342 EGLN2Q96KS0 407 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 BTBD2Q9BX70 525 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 HDHD5Q9BXW7 423 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 DLL4Q9NR61 685 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 PLSCR4Q9NRQ2 329 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 FLRT3Q9NZU0 649 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 AKAP6Q13023 2319 aa14.71□□□□□ -0.05
DDR1-229ENST00000396342 ARHGAP21Q5T5U3 1957 aa14.71□□□□□ -0.06
DDR1-229ENST00000396342 A0A1W2PRB8 838 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 CFLARO15519 480 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 CXCL13O43927 109 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 TMCC2O75069 709 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 KCNK2O95069 426 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 PPP2R2BQ00005 443 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 RNPS1Q15287 305 aaKnown RBP14.7□□□□□ -0.06
DDR1-229ENST00000396342 FAM219BQ5XKK7 198 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 ALKBH2Q6NS38 261 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 MFSD12Q6NUT3 480 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 ZNF550Q7Z398 422 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 MTERF4Q7Z6M4 381 aaKnown RBP14.7□□□□□ -0.06
DDR1-229ENST00000396342 YTHDF3Q7Z739 585 aaKnown RBP14.7□□□□□ -0.06
DDR1-229ENST00000396342 C10orf107Q8IVU9 208 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 C4orf33Q8N1A6 199 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 STEAP2Q8NFT2 490 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 OR56A1Q8NGH5 318 aa14.7□□□□□ -0.06
DDR1-229ENST00000396342 CLHC1Q8NHS4 586 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms