RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 ABATP80404 500 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 TSPAN31Q12999 210 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 DSG2Q14126 1118 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 TRAM2Q15035 370 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 MTFR2Q6P444 385 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 LRRTM4Q86VH4 590 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 KLHL36Q8N4N3 616 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 PIGXQ8TBF5 258 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 RFKQ969G6 155 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 FERD3LQ96RJ6 166 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 DDX31Q9H8H2 851 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 MRPS18AQ9NVS2 196 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 KLHL21Q9UJP4 597 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 KIAA1549LQ6ZVL6 1849 aa13.12□□□□□ -0.31
CCHCR1-203ENST00000396268 LOC105369274A0A096LPK9 316 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 FAM183AA6NL82 134 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 LANCL1O43813 399 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 SLC2A10O95528 541 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 IGFBP4P22692 258 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 CSNK1G2P78368 415 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 TNK1Q13470 666 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 GNA13Q14344 377 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 MZT2AQ6P582 158 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 BHLHB9Q6PI77 547 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 NKAIN4Q8IVV8 208 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 OR4N4Q8N0Y3 316 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 LINC01555Q8NAE3 123 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 SENP5Q96HI0 755 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 PINK1Q9BXM7 581 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 TEX12Q9BXU0 123 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 BCL2L10Q9HD36 194 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 PTGFRNQ9P2B2 879 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 SERGEFQ9UGK8 458 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 ENTPD4Q9Y227 616 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 A0A0G2JPF8 293 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 A0A1W2PPV9 198 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 HNRNPCL2B2RXH8 293 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 HNRNPCL3B7ZW38 293 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 CASC3O15234 703 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 HNRNPCL4P0DMR1 293 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 DRD2P14416 443 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 DUSP2Q05923 314 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 DPTQ07507 201 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 TGM3Q08188 693 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 RPA4Q13156 261 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 ARHGAP19Q14CB8 494 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 IDNKQ5T6J7 187 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 IDO2Q6ZQW0 420 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 CREB3L2Q70SY1 520 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 ZNF767PQ75MW2 155 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 ZNF765Q7L2R6 523 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 C9orf62Q8N4C0 152 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 OR51G2Q8NGK0 314 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 FCRL4Q96PJ5 515 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 TBX5Q99593 518 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 PCBD2Q9H0N5 130 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 IMP3Q9NV31 184 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 TAS2R7Q9NYW3 318 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 ATG4BQ9Y4P1 393 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 PCDHGB7Q9Y5F8 929 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 SPEGQ15772 3267 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 TICRRQ7Z2Z1 1910 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 A0A0A6YYD5 115 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 EDDM13A0A1B0GTR0 161 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 LRIT2A6NDA9 550 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 KDM4EB2RXH2 506 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 MAN2B1O00754 1011 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 PROM1O43490 865 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 ORC5O43913 435 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 SLC22A5O76082 557 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 TRHRP34981 398 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 RGS8P57771 180 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 ST3GAL3Q11203 375 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 C2orf27AQ580R0 203 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 RASSF6Q6ZTQ3 369 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 PLEKHM3Q6ZWE6 761 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 NRMQ8IXM6 262 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 OR11H4Q8NGC9 324 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 OR4Q3Q8NH05 313 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 SUSD6Q92537 303 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 CNRIP1Q96F85 164 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 CAMK1GQ96NX5 476 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 TMEM43Q9BTV4 400 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 OBP2AQ9NY56 170 aa13.11□□□□□ -0.31
CCHCR1-203ENST00000396268 A0A0A6YYJ9 748 aa13.1□□□□□ -0.31
CCHCR1-203ENST00000396268 H3BUI4 141 aa13.1□□□□□ -0.31
CCHCR1-203ENST00000396268 HRGP04196 525 aa13.1□□□□□ -0.31
CCHCR1-203ENST00000396268 MC3RP41968 323 aa13.1□□□□□ -0.31
CCHCR1-203ENST00000396268 ELAVL3Q14576 367 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-203ENST00000396268 MLC1Q15049 377 aa13.1□□□□□ -0.31
CCHCR1-203ENST00000396268 C18orf63Q68DL7 685 aa13.1□□□□□ -0.31
CCHCR1-203ENST00000396268 CD200R1LQ6Q8B3 271 aa13.1□□□□□ -0.31
CCHCR1-203ENST00000396268 ZNF680Q8NEM1 530 aa13.1□□□□□ -0.31
CCHCR1-203ENST00000396268 AKAP1Q92667 903 aaKnown RBP eCLIP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms