RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 FCRL6Q6DN72 434 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 GPR139Q6DWJ6 353 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 TMEM81Q6P7N7 255 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 LRRC69Q6ZNQ3 347 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 GDPGP1Q6ZNW5 385 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 WDR5BQ86VZ2 330 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 TRAPPC5Q8IUR0 188 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 TIGD4Q8IY51 512 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 SLC22A18ASQ8N1D0 253 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 C10orf111Q8N326 155 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 ZBTB44Q8NCP5 570 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 C11orf65Q8NCR3 313 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 OR52H1Q8NGJ2 320 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 OR8K5Q8NH50 307 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 WDR36Q8NI36 951 aaKnown RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 BBS10Q8TAM1 723 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 NUDT8Q8WV74 236 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 MVB12AQ96EY5 273 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 WBP1Q96G27 269 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 ARHGDIGQ99819 225 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 MYOCQ99972 504 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 MARVELD1Q9BSK0 173 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 INPP5KQ9BT40 448 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 LMF2Q9BU23 707 aaKnown RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 THUMPD3Q9BV44 507 aaKnown RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 MIXL1Q9H2W2 232 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 TPT1P8Q9HAU6 139 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 FGF22Q9HCT0 170 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 LIPT1Q9Y234 373 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 TRPM6Q9BX84 2022 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 RAB19A4D1S5 217 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 FAAHO00519 579 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 SRPX2O60687 465 aaPredicted RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 SEMA4FO95754 770 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 TNFP01375 233 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 ADRA2AP08913 450 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 HIST1H1TP22492 207 aaPredicted RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 ATP5A1P25705 553 aaKnown RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 RORAP35398 523 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 SOX18P35713 384 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 BCL6P41182 706 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 GPR85P60893 370 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 GAB1Q13480 694 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 FAM53BQ14153 422 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 GRK1Q15835 563 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 CPSF6Q16630 551 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS41-203ENST00000395969 TYW3Q6IPR3 259 aaKnown RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 BHLHB9Q6PI77 547 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 VN1R4Q7Z5H5 301 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 GALNT10Q86SR1 603 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 COMMD7Q86VX2 200 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 GHDCQ8N2G8 530 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 ARL6IP6Q8N6S5 226 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 OR56A1Q8NGH5 318 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 SUN3Q8TAQ9 357 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 ZBED6CLQ96FA7 236 aaPredicted RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 SORCS2Q96PQ0 1159 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 USB1Q9BQ65 265 aaKnown RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 FAIM2Q9BWQ8 316 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 ASPNQ9BXN1 380 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 SEMA6CQ9H3T2 930 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 RBFOX1Q9NWB1 397 aaKnown RBP5.01□□□□□ -1.61
VPS41-203ENST00000395969 GPR83Q9NYM4 423 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 EXPH5Q8NEV8 1989 aa5.01□□□□□ -1.61
VPS41-203ENST00000395969 NUP214P35658 2090 aaPredicted RBP5□□□□□ -1.61
VPS41-203ENST00000395969 TRAV20A0A0B4J274 112 aa5□□□□□ -1.61
VPS41-203ENST00000395969 A0A0G2JPF8 293 aa5□□□□□ -1.61
VPS41-203ENST00000395969 C2orf92A0A1B0GVN3 265 aa5□□□□□ -1.61
VPS41-203ENST00000395969 GSAPA4D1B5 854 aa5□□□□□ -1.61
VPS41-203ENST00000395969 HNRNPCL3B7ZW38 293 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZNF670-ZNF695F2Z2N8 137 aa5□□□□□ -1.61
VPS41-203ENST00000395969 K7ESF4 209 aa5□□□□□ -1.61
VPS41-203ENST00000395969 BTN3A3O00478 584 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PLOD3O60568 738 aa5□□□□□ -1.61
VPS41-203ENST00000395969 SLC43A1O75387 559 aa5□□□□□ -1.61
VPS41-203ENST00000395969 VIPP01282 170 aa5□□□□□ -1.61
VPS41-203ENST00000395969 RAF1P04049 648 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PCCBP05166 539 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ASGR2P07307 311 aa5□□□□□ -1.61
VPS41-203ENST00000395969 HNRNPCL4P0DMR1 293 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ENGP17813 658 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PPP2R1BP30154 601 aa5□□□□□ -1.61
VPS41-203ENST00000395969 GPC1P35052 558 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ADH7P40394 386 aa5□□□□□ -1.61
VPS41-203ENST00000395969 GBX2P52951 348 aaPredicted RBP5□□□□□ -1.61
VPS41-203ENST00000395969 TNFRSF17Q02223 184 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ST3GAL4Q11206 333 aa5□□□□□ -1.61
VPS41-203ENST00000395969 CCDC85BQ15834 202 aaPredicted RBP5□□□□□ -1.61
VPS41-203ENST00000395969 COL28A1Q2UY09 1125 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZNF528Q3MIS6 628 aa5□□□□□ -1.61
VPS41-203ENST00000395969 SPDYE7PQ495Y7 208 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PLET1Q6UQ28 207 aa5□□□□□ -1.61
VPS41-203ENST00000395969 SCIMPQ6UWF3 145 aa5□□□□□ -1.61
VPS41-203ENST00000395969 DGLUCYQ7Z3D6 616 aa5□□□□□ -1.61
VPS41-203ENST00000395969 C17orf47Q8NEP4 570 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ENKURQ8TC29 256 aa5□□□□□ -1.61
VPS41-203ENST00000395969 AKAP1Q92667 903 aaKnown RBP eCLIP5□□□□□ -1.61
VPS41-203ENST00000395969 UPRTQ96BW1 309 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PPCDCQ96CD2 204 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ZC3H10Q96K80 434 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms