RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CEP70Q8NHQ1 597 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.22■□□□□ 0.192e-6■■■□□ 18.6
CXCL12-204ENST00000395793 TRIM44Q96DX7 344 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-204ENST00000395793 FAM120BQ96EK7 910 aaKnown RBP16.22■□□□□ 0.19
CXCL12-204ENST00000395793 C3orf30Q96M34 536 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 PIGQQ9BRB3 760 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 TMED5Q9Y3A6 229 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 ZNF175Q9Y473 711 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 SCAMP2O15127 329 aaKnown RBP16.21■□□□□ 0.19
CXCL12-204ENST00000395793 AQP8O94778 261 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 GOSR1O95249 250 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 NGFRP08138 427 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 ASMTP46597 345 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 EEF1A1P68104 462 aaKnown RBP16.21■□□□□ 0.19
CXCL12-204ENST00000395793 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.21■□□□□ 0.19
CXCL12-204ENST00000395793 CCNJQ5T5M9 372 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 EEF1A1P5Q5VTE0 462 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 CHDHQ8NE62 594 aaPredicted RBP16.21■□□□□ 0.19
CXCL12-204ENST00000395793 OR7A2PQ8NGA2 310 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 TCP10LQ8TDR4 215 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 MTERF3Q96E29 417 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 PGM2Q96G03 612 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 WFIKKN1Q96NZ8 548 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 IQCGQ9H095 443 aaKnown RBP16.21■□□□□ 0.19
CXCL12-204ENST00000395793 DLL4Q9NR61 685 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 ATP6V1HQ9UI12 483 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 AP4B1Q9Y6B7 739 aa16.21■□□□□ 0.19
CXCL12-204ENST00000395793 RAI1Q7Z5J4 1906 aaPredicted RBP16.2■□□□□ 0.18
CXCL12-204ENST00000395793 LINC01387J3KSC0 135 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 PEX11AO75192 247 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 TBXA2RP21731 343 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 PSMA4P25789 261 aaKnown RBP16.2■□□□□ 0.18
CXCL12-204ENST00000395793 CD79BP40259 229 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 SLC6A8P48029 635 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 EEFSECP57772 596 aaKnown RBP16.2■□□□□ 0.18
CXCL12-204ENST00000395793 ADAM8P78325 824 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 PTGR1Q14914 329 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 CD226Q15762 336 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 CTU2Q2VPK5 515 aaKnown RBP16.2■□□□□ 0.18
CXCL12-204ENST00000395793 DEFB113Q30KQ7 82 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 VPS26BQ4G0F5 336 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 KRTAP1-3Q8IUG1 177 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 C1orf50Q9BV19 199 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 KLHL28Q9NXS3 571 aa16.2■□□□□ 0.18
CXCL12-204ENST00000395793 DEFB108AA8MXU0 73 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 CTIFO43310 598 aaKnown RBP16.19■□□□□ 0.18
CXCL12-204ENST00000395793 NDUFB5O43674 189 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 HMGN2P05204 90 aaKnown RBP16.19■□□□□ 0.18
CXCL12-204ENST00000395793 LAMP1P11279 417 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 CD53P19397 219 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 PCYT1AP49585 367 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 KEAP1Q14145 624 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 MLC1Q15049 377 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 C22orf34Q6ZV56 151 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 CAMKMTQ7Z624 323 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 COX18Q8N8Q8 333 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 OR6Y1Q8NGX8 325 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 POC1BQ8TC44 478 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 AENQ8WTP8 325 aaKnown RBP16.19■□□□□ 0.18
CXCL12-204ENST00000395793 CDS1Q92903 461 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 SH3YL1Q96HL8 342 aaPredicted RBP16.19■□□□□ 0.18
CXCL12-204ENST00000395793 ADGRG7Q96K78 797 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 C6orf203Q9P0P8 240 aaPredicted RBP16.19■□□□□ 0.18
CXCL12-204ENST00000395793 ZDHHC2Q9UIJ5 367 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 HEATR5AQ86XA9 2040 aa16.19■□□□□ 0.18
CXCL12-204ENST00000395793 NPIPA5A0A0B4J1W7 369 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 A0A1W2PRB8 838 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 NPIPA7E9PJI5 369 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 EIF1AYO14602 144 aaKnown RBP16.18■□□□□ 0.18
CXCL12-204ENST00000395793 OIP5O43482 229 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 SKAP2O75563 359 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-204ENST00000395793 SLU7O95391 586 aaKnown RBP16.18■□□□□ 0.18
CXCL12-204ENST00000395793 OPN1LWP04000 364 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 ALOX5P09917 674 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 NPIPA8P0DM63 369 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 ZNF17P17021 662 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 HPCAL1P37235 193 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 RNF144AP50876 292 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-204ENST00000395793 RPS3AP61247 264 aaKnown RBP16.18■□□□□ 0.18
CXCL12-204ENST00000395793 LASP1Q14847 261 aaKnown RBP16.18■□□□□ 0.18
CXCL12-204ENST00000395793 PLPPR5Q32ZL2 321 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 C6orf136Q5SQH8 315 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 ZNF550Q7Z398 422 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 R3HCC1LQ7Z5L2 792 aaKnown RBP16.18■□□□□ 0.18
CXCL12-204ENST00000395793 GTPBP8Q8N3Z3 284 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-204ENST00000395793 KRTCAP2Q8N6L1 136 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 ZNF610Q8N9Z0 462 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 WFDC11Q8NEX6 87 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 JADE3Q92613 823 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 PPP3R2Q96LZ3 170 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 RNF145Q96MT1 663 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 CXorf36Q9H7Y0 433 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 ZCCHC3Q9NUD5 404 aaKnown RBP16.18■□□□□ 0.18
CXCL12-204ENST00000395793 MED17Q9NVC6 651 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 NDRG3Q9UGV2 375 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 CLEC4AQ9UMR7 237 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 KCNE3Q9Y6H6 103 aa16.18■□□□□ 0.18
CXCL12-204ENST00000395793 PRR14LQ5THK1 2151 aa16.17■□□□□ 0.18
CXCL12-204ENST00000395793 C7orf72A4D263 438 aa16.17■□□□□ 0.18
CXCL12-204ENST00000395793 CD8BP10966 210 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms