RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CD180Q99467 661 aa12.39□□□□□ -0.43
NFKB1-202ENST00000394820 MRPS30Q9NP92 439 aaKnown RBP12.39□□□□□ -0.43
NFKB1-202ENST00000394820 A0A087WUU8 490 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 OTOL1A6NHN0 477 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 GTPBP1O00178 669 aaKnown RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 PLPP1O14494 284 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SLC9A3R1O14745 358 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 ARPC1BO15143 372 aaKnown RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 GCM2O75603 506 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 RFPL3O75679 317 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 PDGFAP04085 211 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 C2orf27AQ580R0 203 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 OR2T33Q8NG76 320 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SETD6Q8TBK2 473 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 TMEM255BQ8WV15 326 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 ERMAPQ96PL5 475 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 NEUROD4Q9HD90 331 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 KRCC1Q9NPI7 259 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 GLTPQ9NZD2 209 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 KCNE3Q9Y6H6 103 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 UBE2QL1A1L167 161 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SIGLEC5O15389 551 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 PLA2G10O15496 165 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 LILRB3O75022 631 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 MOSPD3O75425 235 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SLCO2B1O94956 709 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 IL1AP01583 271 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 CLUP10909 449 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 MPIP34949 423 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 RPL35P42766 123 aaKnown RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 OMPP47874 163 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SIGLEC14Q08ET2 396 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF761Q86XN6 746 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF784Q8NCA9 323 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SIMC1Q8NDZ2 872 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 OR4D11Q8NGI4 311 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 C4orf36Q96KX1 117 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SEMA4CQ9C0C4 833 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SLC35C2Q9NQQ7 365 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 RCE1Q9Y256 329 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 ACOD1A6NK06 481 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 ASGR2P07307 311 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 MMP12P39900 470 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SCGB2B2Q4G0G5 96 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 MEDAGQ5VYS4 303 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 FAM83HQ6ZRV2 1179 aaPredicted RBP12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SLC9B2Q86UD5 537 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 GPR32P1Q8NGA4 272 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 ST8SIA2Q92186 375 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 SEC22CQ9BRL7 303 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 GABARAPL1Q9H0R8 117 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 MIXL1Q9H2W2 232 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 NAALAD2Q9Y3Q0 740 aa12.38□□□□□ -0.43
NFKB1-202ENST00000394820 TRIOO75962 3097 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 A0A0A6YYJ9 748 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 TMPRSS11DO60235 418 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 PPP1R3DO95685 299 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 LALBAP00709 142 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 MAS1P04201 325 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 SOX9P48436 509 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 ILKQ13418 452 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 PLK5Q496M5 336 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 C7orf61Q8IZ16 206 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 SLC44A3Q8N4M1 653 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 METTL27Q8N6F8 245 aaPredicted RBP12.37□□□□□ -0.43
NFKB1-202ENST00000394820 SDR9C7Q8NEX9 313 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 GIMAP1Q8WWP7 306 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 MRGPRX3Q96LB0 322 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 DCLRE1CQ96SD1 692 aaKnown RBP12.37□□□□□ -0.43
NFKB1-202ENST00000394820 SDHCQ99643 169 aaPredicted RBP12.37□□□□□ -0.43
NFKB1-202ENST00000394820 CDCA4Q9BXL8 241 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 SRA1Q9HD15 236 aaKnown RBP12.37□□□□□ -0.43
NFKB1-202ENST00000394820 FARSAQ9Y285 508 aaKnown RBP12.37□□□□□ -0.43
NFKB1-202ENST00000394820 CACNG2Q9Y698 323 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 V9GYH0 126 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 AGAP14A8MT82 685 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 H0YIV9 168 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 EFEMP2O95967 443 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 CRYBA2P53672 197 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF234Q14588 700 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 BCL2A1Q16548 175 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 FOXRED2Q8IWF2 684 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 SRFBP1Q8NEF9 429 aaKnown RBP12.37□□□□□ -0.43
NFKB1-202ENST00000394820 OR52E2Q8NGJ4 325 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 FANK1Q8TC84 345 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 SPPL3Q8TCT6 385 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 LCN9Q8WX39 176 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 MSLNLQ96KJ4 702 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 DDOQ99489 341 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 SPATA6Q9NWH7 488 aaPredicted RBP12.37□□□□□ -0.43
NFKB1-202ENST00000394820 PFDN2Q9UHV9 154 aa12.37□□□□□ -0.43
NFKB1-202ENST00000394820 EXOSC1Q9Y3B2 195 aaKnown RBP12.37□□□□□ -0.43
NFKB1-202ENST00000394820 IGLV3-16A0A075B6K0 115 aa12.36□□□□□ -0.43
NFKB1-202ENST00000394820 TRBV2A0A0J9YWF9 115 aa12.36□□□□□ -0.43
NFKB1-202ENST00000394820 SLC9B1P1A6NJY1 282 aa12.36□□□□□ -0.43
NFKB1-202ENST00000394820 H3BUI4 141 aa12.36□□□□□ -0.43
NFKB1-202ENST00000394820 CACNB4O00305 520 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms