RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 OR52E1Q8NGJ3 308 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 OR2T35Q8NGX2 323 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 ACTRT3Q9BYD9 372 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 NPAP1Q9NZP6 1156 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 MAGEB4O15481 346 aaPredicted RBP15.11■□□□□ 0.01
PCDH1-203ENST00000394536 PPP1R3DO95685 299 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 CRYZQ08257 329 aaKnown RBP15.11■□□□□ 0.01
PCDH1-203ENST00000394536 BIKQ13323 160 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 PRSS53Q2L4Q9 553 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 RPTNQ6XPR3 784 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 GATSQ8NAP1 163 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 C4orf36Q96KX1 117 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 ATP13A2Q9NQ11 1180 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 SESN1Q9Y6P5 492 aa15.11■□□□□ 0.01
PCDH1-203ENST00000394536 A0A1W2PQU0 124 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 A0A1W2PR48 441 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 DPM1O60762 260 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 CLEC3AO75596 197 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 LGI1O95970 557 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 APODP05090 189 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 RAB3BP20337 219 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 RFX2P48378 723 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 IRF3Q14653 427 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 PON3Q15166 354 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 ZNF79Q15937 498 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 TMEM35AQ53FP2 167 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 ACSM3Q53FZ2 586 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 SIMC1Q8NDZ2 872 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 RPLP0P6Q8NHW5 317 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 CHFRQ96EP1 664 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 MTHFD2LQ9H903 347 aaPredicted RBP15.1■□□□□ 0.01
PCDH1-203ENST00000394536 FOLH1BQ9HBA9 442 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 FKBP7Q9Y680 259 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 DOCK6Q96HP0 2047 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 TRBV2A0A0J9YWF9 115 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 C17orf113A0A1B0GUU1 675 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 UBE2QL1A1L167 161 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 CASC3O15234 703 aaKnown RBP15.1■□□□□ 0.01
PCDH1-203ENST00000394536 OLFM2O95897 454 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 CPEP16870 476 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 RRAS2P62070 204 aaPredicted RBP15.1■□□□□ 0.01
PCDH1-203ENST00000394536 TSPAN5P62079 268 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 HTRA3P83110 453 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 POU4F3Q15319 338 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 CHST8Q9H2A9 424 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 HINT3Q9NQE9 182 aaKnown RBP15.1■□□□□ 0.01
PCDH1-203ENST00000394536 GTPBP1O00178 669 aaKnown RBP15.1■□□□□ 0.01
PCDH1-203ENST00000394536 ARL6IP5O75915 188 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 OR6A2O95222 327 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 SEMG1P04279 462 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 ELK1P19419 428 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 AK4P27144 223 aaPredicted RBP15.1■□□□□ 0.01
PCDH1-203ENST00000394536 ITPKBP27987 946 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 PDX1P52945 283 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 PUS10Q3MIT2 529 aaKnown RBP15.1■□□□□ 0.01
PCDH1-203ENST00000394536 OR2L5Q8NG80 312 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 TNFAIP8L1Q8WVP5 186 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 RAB11FIP5Q9BXF6 653 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 OR10A4Q9H209 315 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 TCF7L1Q9HCS4 588 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 ZNF69Q9UC07 566 aa15.1■□□□□ 0.01
PCDH1-203ENST00000394536 GREM1O60565 184 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 CRYZL1O95825 349 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 SNRPBP14678 240 aaKnown RBP15.09■□□□□ 0.01
PCDH1-203ENST00000394536 GABRB1P18505 474 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 ATP5A1P25705 553 aaKnown RBP15.09■□□□□ 0.01
PCDH1-203ENST00000394536 PSMB10P40306 273 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 P2RY2P41231 377 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 TEKQ02763 1124 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 PDE7AQ13946 482 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 HES5Q5TA89 166 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 ZNF613Q6PF04 617 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 ZNF547Q8IVP9 402 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 GON7Q9BXV9 100 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 TTYH1Q9H313 450 aaPredicted RBP15.09■□□□□ 0.01
PCDH1-203ENST00000394536 REV1Q9UBZ9 1251 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 MAU2Q9Y6X3 613 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 LRIT2A6NDA9 550 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 ZNF888P0CJ79 500 aaPredicted RBP15.09■□□□□ 0.01
PCDH1-203ENST00000394536 OMPP47874 163 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 FBXW4P57775 412 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 OR12D2P58182 307 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 C12orf40Q86WS4 652 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 OR4M1Q8NGD0 313 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 OR13C2Q8NGS9 318 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 CCDC120Q96HB5 630 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 ISG20L2Q9H9L3 353 aaKnown RBP15.09■□□□□ 0.01
PCDH1-203ENST00000394536 NFKBIL1Q9UBC1 381 aaPredicted RBP15.09■□□□□ 0.01
PCDH1-203ENST00000394536 CDH10Q9Y6N8 788 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 V9GYH0 126 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 TSC2P49815 1807 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 LRRN3E7EW58 273 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 B4GALT2O60909 372 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 MT-ND4P03905 459 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 H2AFB2P0C5Z0 115 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 TYRP1P17643 537 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 BCL6P41182 706 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 PITPNAQ00169 270 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 RASSF6Q6ZTQ3 369 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 ESPNLQ6ZVH7 1005 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms