RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 KLHL26Q53HC5 615 aa22.3■■□□□ 1.16
LRFN4-202ENST00000393952 RNF220Q5VTB9 566 aa22.3■■□□□ 1.16
LRFN4-202ENST00000393952 TSEN54Q7Z6J9 526 aaKnown RBP22.3■■□□□ 1.16
LRFN4-202ENST00000393952 LACC1Q8IV20 430 aa22.3■■□□□ 1.16
LRFN4-202ENST00000393952 CLEC1AQ8NC01 280 aa22.3■■□□□ 1.16
LRFN4-202ENST00000393952 HGDQ93099 445 aa22.3■■□□□ 1.16
LRFN4-202ENST00000393952 CCNL2Q96S94 520 aaPredicted RBP22.3■■□□□ 1.16
LRFN4-202ENST00000393952 ARHGDIGQ99819 225 aa22.3■■□□□ 1.16
LRFN4-202ENST00000393952 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.3■■□□□ 1.16
LRFN4-202ENST00000393952 DTNAQ9Y4J8 743 aa22.3■■□□□ 1.16
LRFN4-202ENST00000393952 OR6B1O95007 311 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 HOXB6P17509 224 aaKnown RBP22.29■■□□□ 1.16
LRFN4-202ENST00000393952 TMED10P49755 219 aaKnown RBP22.29■■□□□ 1.16
LRFN4-202ENST00000393952 SSR4P51571 173 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 FGFBP1Q14512 234 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 NRF1Q16656 503 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 IQCCQ4KMZ1 466 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 CRTC2Q53ET0 693 aaPredicted RBP22.29■■□□□ 1.16
LRFN4-202ENST00000393952 EIPR1Q53HC9 387 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 APOOLQ6UXV4 268 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 ERMP1Q7Z2K6 904 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 RBM45Q8IUH3 476 aaKnown RBP22.29■■□□□ 1.16
LRFN4-202ENST00000393952 PQLC1Q8N2U9 271 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 TMEM102Q8N9M5 508 aaPredicted RBP22.29■■□□□ 1.16
LRFN4-202ENST00000393952 SPACA9Q96E40 222 aaPredicted RBP22.29■■□□□ 1.16
LRFN4-202ENST00000393952 DPH1Q9BZG8 443 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 AMBRA1Q9C0C7 1298 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 LHPPQ9H008 270 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 YY1AP1Q9H869 796 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 ABCG2Q9UNQ0 655 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 CDHR4A6H8M9 788 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 SERINC4A6NH21 518 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 SCDO00767 359 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 IFNW1P05000 195 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 HPGDP15428 266 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 KCNC4Q03721 635 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 ZNF791Q3KP31 576 aaPredicted RBP22.29■■□□□ 1.16
LRFN4-202ENST00000393952 HMBOX1Q6NT76 420 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 OPN5Q6U736 354 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 NUP54Q7Z3B4 507 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 AMIGO2Q86SJ2 522 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 GATSQ8NAP1 163 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 ZNF527Q8NB42 609 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 ASB15Q8WXK1 588 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 NODALQ96S42 347 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 CCDC86Q9H6F5 360 aaKnown RBP22.29■■□□□ 1.16
LRFN4-202ENST00000393952 KLHL28Q9NXS3 571 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 SLC9A8Q9Y2E8 581 aa22.29■■□□□ 1.16
LRFN4-202ENST00000393952 DIRAS1O95057 198 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 NGFRP08138 427 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 FASP25445 335 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 RRADP55042 308 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 NTRK2Q16620 822 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 ACER2Q5QJU3 275 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 PIWIL3Q7Z3Z3 882 aaKnown RBP22.28■■□□□ 1.16
LRFN4-202ENST00000393952 POGLUT1Q8NBL1 392 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 OR6T1Q8NGN1 323 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 OIT3Q8WWZ8 545 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 CNOT9Q92600 299 aaKnown RBP22.28■■□□□ 1.16
LRFN4-202ENST00000393952 NDUFAF4Q9P032 175 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 DKK4Q9UBT3 224 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 RIMS3Q9UJD0 308 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 POLHQ9Y253 713 aa22.28■■□□□ 1.16
LRFN4-202ENST00000393952 FADS1O60427 444 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 FCGR1AP12314 374 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 YAP1P46937 504 aaKnown RBP22.27■■□□□ 1.16
LRFN4-202ENST00000393952 SESN3P58005 492 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 CD226Q15762 336 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 NPTX1Q15818 432 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 MEP1AQ16819 746 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 FNDC7Q5VTL7 733 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 IL20RBQ6UXL0 311 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 OR10G3Q8NGC4 313 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 TTC9Q92623 222 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 RTN4RQ9BZR6 473 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 ARMC7Q9H6L4 198 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 AGPAT4Q9NRZ5 378 aa22.27■■□□□ 1.16
LRFN4-202ENST00000393952 ASPMQ8IZT6 3477 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 DNAJB5O75953 348 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 EVI2BP34910 448 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 RGS8P57771 180 aaPredicted RBP22.26■■□□□ 1.15
LRFN4-202ENST00000393952 SLC34A1Q06495 639 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 ATP6AP1Q15904 470 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 NDUFAF6Q330K2 333 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 DEF8Q6ZN54 512 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 CMIPQ8IY22 773 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 GALNT16Q8N428 558 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 TMEM156Q8N614 296 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 GRHL3Q8TE85 626 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 GATA6Q92908 595 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 TMCO6Q96DC7 493 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 ZNF300Q96RE9 604 aaPredicted RBP22.26■■□□□ 1.15
LRFN4-202ENST00000393952 TBL1XR1Q9BZK7 514 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 SEMA6AQ9H2E6 1030 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 DNAJB12Q9NXW2 375 aaKnown RBP22.26■■□□□ 1.15
LRFN4-202ENST00000393952 C6orf203Q9P0P8 240 aaPredicted RBP22.26■■□□□ 1.15
LRFN4-202ENST00000393952 ENPP4Q9Y6X5 453 aa22.26■■□□□ 1.15
LRFN4-202ENST00000393952 ACACAQ13085 2346 aa22.25■■□□□ 1.15
LRFN4-202ENST00000393952 CLOCKO15516 846 aa22.25■■□□□ 1.15
LRFN4-202ENST00000393952 CST1P01037 141 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms