RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 C1RLQ9NZP8 487 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ADAM29Q9UKF5 820 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 NIP7Q9Y221 180 aaKnown RBP eCLIP3.26□□□□□ -1.89
XRN1-202ENST00000392981 URGCP-MRPS24S4R325 110 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 AQRO60306 1485 aaKnown RBP eCLIP3.26□□□□□ -1.897e-7■■■□□ 17.9
XRN1-202ENST00000392981 SH3PXD2BA1X283 911 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 DFFAO00273 331 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 WIPF1O43516 503 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 SCN2BO60939 215 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 LDOC1O95751 146 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 TSPAN12O95859 305 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ZNF26P17031 533 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 IGFBP2P18065 325 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PGAM1P18669 254 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CXCR3P49682 368 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 HSPA2P54652 639 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 DAOAP59103 153 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PPIAP62937 165 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 EWSR1Q01844 656 aaKnown RBP eCLIP3.26□□□□□ -1.89
XRN1-202ENST00000392981 IRF8Q02556 426 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 GLO1Q04760 184 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 TROAPQ12815 778 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CNTN1Q12860 1018 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 IDI1Q13907 227 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ANKRD55Q3KP44 614 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 FAM151BQ6UXP7 276 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 NHLRC1Q6VVB1 395 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 BCDIN3DQ7Z5W3 292 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 ZNF554Q86TJ5 538 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 SFR1Q86XK3 245 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 LRRC56Q8IYG6 542 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 PRSS35Q8N3Z0 413 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 NPEPL1Q8NDH3 523 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 B3GNT7Q8NFL0 401 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 OR2T12Q8NG77 320 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 HSD17B8Q92506 261 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 IGSF21Q96ID5 467 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PLEKHA8Q96JA3 519 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 LMLNQ96KR4 655 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 ATP5SQ99766 215 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 NAT9Q9BTE0 207 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 SF3B5Q9BWJ5 86 aaKnown RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 ILKAPQ9H0C8 392 aaPredicted RBP3.26□□□□□ -1.89
XRN1-202ENST00000392981 LRRC19Q9H756 370 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 TMEM45AQ9NWC5 275 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 WNT16Q9UBV4 365 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 DCDC2Q9UHG0 476 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 MAP3K1Q13233 1512 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 CEP162Q5TB80 1403 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 PPIP5K1Q6PFW1 1433 aa3.26□□□□□ -1.89
XRN1-202ENST00000392981 A0A1B0GUH1 482 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TFECO14948 347 aaPredicted RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 TRAPPC3O43617 180 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ETHE1O95571 254 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 GCP02774 474 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 RHOCP08134 193 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 PI3P19957 117 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MMP11P24347 488 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 DCKP27707 260 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TIA1P31483 386 aaKnown RBP eCLIP3.25□□□□□ -1.89
XRN1-202ENST00000392981 PTGER4P35408 488 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ACVR1BP36896 505 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 DCAF4L1Q3SXM0 396 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 DPY19L2P2Q6ZN68 376 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ZNF621Q6ZSS3 439 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TTLL10Q6ZVT0 673 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NIPA1Q7RTP0 329 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 AKAP14Q86UN6 197 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MCOLN2Q8IZK6 566 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR4F17Q8NGA8 305 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR4F5Q8NH21 305 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 EMG1Q92979 244 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR4F4Q96R69 305 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NDUFAF3Q9BU61 184 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TRMOQ9BU70 441 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MCUBQ9NWR8 336 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 CNOT11Q9UKZ1 510 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.25□□□□□ -1.89
XRN1-202ENST00000392981 GAB2Q9UQC2 676 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MROH7-TTC4A0A0A0MT08 1334 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ELP1O95163 1332 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 MROH7Q68CQ1 1323 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 A0A0U1RQF3 1178 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 SNTNA6NMZ2 147 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 HCN1O60741 890 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 FARS2O95363 451 aaKnown RBP3.25□□□□□ -1.89
XRN1-202ENST00000392981 CLDN9O95484 217 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 TXNDC12O95881 172 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 NGFRP08138 427 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 SLC6A8P48029 635 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 PSMD5Q16401 504 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 UPP1Q16831 310 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 KLHL38Q2WGJ6 581 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 OR4C11Q6IEV9 310 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ADGRG3Q86Y34 549 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 ZFP82Q8N141 532 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 EID2Q8N6I1 236 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 RDH11Q8TC12 318 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 GLYATL2Q8WU03 294 aa3.25□□□□□ -1.89
XRN1-202ENST00000392981 LIPHQ8WWY8 451 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms