RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 CLIC1O00299 241 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 LRRTM2O43300 516 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 KIAA0513O60268 411 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 C1QCP02747 245 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 NPIPA8P0DM63 369 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 HOXB9P17482 250 aaPredicted RBP13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 DPP4P27487 766 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 MSX1P28360 303 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 SEC24CP53992 1094 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 GYS2P54840 703 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 DSTNP60981 165 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 FUT5Q11128 374 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 FADDQ13158 208 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 ZNF630Q2M218 657 aaPredicted RBP13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 KLHL26Q53HC5 615 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 EIPR1Q53HC9 387 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 WIPI1Q5MNZ9 446 aaPredicted RBP13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 COX20Q5RI15 118 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 WLSQ5T9L3 541 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 MTFR2Q6P444 385 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 CLEC18BQ6UXF7 455 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 YRDCQ86U90 279 aaKnown RBP13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 CD163Q86VB7 1156 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 ZNF619Q8N2I2 560 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 ZNF614Q8N883 585 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 GATSQ8NAP1 163 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 CLEC18CQ8NCF0 446 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 RELTQ969Z4 430 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 TRNT1Q96Q11 434 aaKnown RBP13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 ELAC2Q9BQ52 826 aaKnown RBP13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 FAM107BQ9H098 131 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 TAS2R10Q9NYW0 307 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 MED11Q9P086 117 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 SPRR3Q9UBC9 169 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 SUCOQ9UBS9 1254 aaKnown RBP13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 SH3BGRL2Q9UJC5 107 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 CORO2BQ9UQ03 480 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 DTNAQ9Y4J8 743 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 DNAJC13O75165 2243 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 NCKAP5O14513 1909 aa13.68□□□□□ -0.22
IGHV3-53-201ENST00000390627 PRRC2CQ9Y520 2896 aaKnown RBP13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 TMEM247A6NEH6 219 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 C17orf51A8MQB3 221 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 SLC22A2O15244 555 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 ZNHIT1O43257 154 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 FCMRO60667 390 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 CCDC22O60826 627 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 SEMA7AO75326 666 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 NR2F1P10589 423 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 ETFAP13804 333 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 MVDP53602 400 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 KLF10Q13118 480 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 UBAP2LQ14157 1087 aaKnown RBP13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 ZNF141Q15928 474 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 NHSL2Q5HYW2 709 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 TYW3Q6IPR3 259 aaKnown RBP13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 CPLX4Q7Z7G2 160 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 DHDDSQ86SQ9 333 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 FJX1Q86VR8 437 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 IFNEQ86WN2 208 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 DOLPP1Q86YN1 238 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 DPP10Q8N608 796 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 PHOSPHO1Q8TCT1 267 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 TP63Q9H3D4 680 aaPredicted RBP13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 SLC25A37Q9NYZ2 338 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 CALML5Q9NZT1 146 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 ERRFI1Q9UJM3 462 aaPredicted RBP13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 ACAD8Q9UKU7 415 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 MKLN1Q9UL63 735 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 CAPN7Q9Y6W3 813 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 GTF3C1Q12789 2109 aa13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 HELZ2Q9BYK8 2649 aaKnown RBP13.67□□□□□ -0.22
IGHV3-53-201ENST00000390627 FIGNL2A6NMB9 653 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 BBIP1A8MTZ0 92 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 EVPLLA8MZ36 301 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 B4DXG7 233 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 FAM47E-STBD1D6RA91 191 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 CCL21O00585 134 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 HCRTR2O43614 444 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 UGT2B17O75795 530 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 ZIC2O95409 532 aaPredicted RBP13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 H6PDO95479 791 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 ACTL6AO96019 429 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 ESRRAP11474 423 aaPredicted RBP13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 CD1EP15812 388 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 HK1P19367 917 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 DRD4P21917 467 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 SRSF1Q07955 248 aaKnown RBP eCLIP13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 CRYZQ08257 329 aaKnown RBP13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 NFYCQ13952 458 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 GNA13Q14344 377 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 RGNQ15493 299 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 CD226Q15762 336 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 PDZK1Q5T2W1 519 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 AP1ARQ63HQ0 302 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 AAGABQ6PD74 315 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 FRRS1Q6ZNA5 592 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 LRRC74BQ6ZQY2 392 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms