RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 FUNDC2Q9BWH2 189 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GPR61Q9BZJ8 451 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 NOX3Q9HBY0 568 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 IL1RAPL2Q9NP60 686 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 DDX28Q9NUL7 540 aaKnown RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SLCO1C1Q9NYB5 712 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 MIS18AQ9NYP9 233 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 EHFQ9NZC4 300 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 VPS54Q9P1Q0 977 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 DEC1Q9P2X7 70 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SPRR3Q9UBC9 169 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GIMAP2Q9UG22 337 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 NRBP1Q9UHY1 535 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 BTNL2Q9UIR0 455 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GNPTGQ9UJJ9 305 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 ANGPTL2Q9UKU9 493 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 DUSP12Q9UNI6 340 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GPR132Q9UNW8 380 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 DHRS7Q9Y394 339 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SEC16AO15027 2179 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 COL11A1P12107 1806 aaPredicted RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 PDS5BQ9NTI5 1447 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GRIN2DO15399 1336 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 TTC21BQ7Z4L5 1316 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 PASKQ96RG2 1323 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 PIKFYVEQ9Y2I7 2098 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 MDN1Q9NU22 5596 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 IGLV11-55A0A075B6I3 123 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 IGLV3-12A0A075B6K2 115 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 A0A087WV48 116 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 ARHGEF37A1IGU5 675 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 FAM149AA5PLN7 773 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 HTR3EA5X5Y0 456 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 LRIT2A6NDA9 550 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 SAGE2PA6NJ88 616 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 YDJCA8MPS7 323 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 NPIPA2E9PIF3 369 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 TLR4O00206 839 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 PLXNB1O43157 2135 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 ST8SIA3O43173 380 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 EIF5BO60841 1220 aaKnown RBP0.12□□□□□ -2.39
SNORD28-201ENST00000384706 SS18L1O75177 396 aaPredicted RBP0.12□□□□□ -2.39
SNORD28-201ENST00000384706 CRCPO75575 148 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 AKAP3O75969 853 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 CHRNA1P02708 482 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 GLAP06280 429 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 CD55P08174 381 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 ADRA2AP08913 450 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 THRBP10828 461 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 CRISP2P16562 243 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 LGALS3P17931 250 aaKnown RBP0.12□□□□□ -2.39
SNORD28-201ENST00000384706 PGAM1P18669 254 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 TCN2P20062 427 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 ADSSP30520 456 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 MAT2AP31153 395 aaKnown RBP0.12□□□□□ -2.39
SNORD28-201ENST00000384706 RPL4P36578 427 aaKnown RBP0.12□□□□□ -2.39
SNORD28-201ENST00000384706 TGFBR1P36897 503 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 KIR2DS2P43631 304 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 KIR2DS4P43632 304 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 KCNJ1P48048 391 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 STARP49675 285 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 GEMP55040 296 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 LIM2P55344 173 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 HERV-K104P63124 156 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 VLDLRP98155 873 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 CALD1Q05682 793 aaKnown RBP0.12□□□□□ -2.39
SNORD28-201ENST00000384706 C17orf67Q0P5P2 114 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 ST3GAL3Q11203 375 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 WASHC5Q12768 1159 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 PPP2R5CQ13362 524 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 NFE2L1Q14494 772 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 PSG5Q15238 335 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 STX1AQ16623 288 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 KYNUQ16719 465 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 CLPPQ16740 277 aaPredicted RBP0.12□□□□□ -2.39
SNORD28-201ENST00000384706 UBE2SQ16763 222 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 LRRC38Q5VT99 294 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 SLX4IPQ5VYV7 408 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 FBXW9Q5XUX1 488 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 C6orf89Q6UWU4 347 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 ZNF621Q6ZSS3 439 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 SPATA19Q7Z5L4 167 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 ASPGQ86U10 573 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 C17orf82Q86X59 251 aaPredicted RBP0.12□□□□□ -2.39
SNORD28-201ENST00000384706 VRK2Q86Y07 508 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 TMEM126BQ8IUX1 230 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 PCP2Q8IVA1 136 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 KLHL7Q8IXQ5 586 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 UBALD2Q8IYN6 164 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 PGAM4Q8N0Y7 254 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 OSR2Q8N2R0 312 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 CENPSQ8N2Z9 138 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 TEX19Q8NA77 164 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 SYT14Q8NB59 555 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 SIDT2Q8NBJ9 832 aaKnown RBP0.12□□□□□ -2.39
SNORD28-201ENST00000384706 UXS1Q8NBZ7 420 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 OR8H1Q8NGG4 311 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 KIF18AQ8NI77 898 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 IL1F10Q8WWZ1 152 aa0.12□□□□□ -2.39
SNORD28-201ENST00000384706 DNASE1L2Q92874 299 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms