RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 KANTRA0A1W2PQU2 76 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 OR6C76A6NM76 312 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 SLC25A12O75746 678 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 KRT33AO76009 404 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 LATS1O95835 1130 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 CH25HO95992 272 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 TRBC1P01850 177 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 MAT1AQ00266 395 aaKnown RBP14.09□□□□□ -0.15
VLDLR-202ENST00000382099 DHODHQ02127 395 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 PLA2G7Q13093 441 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 METTL7BQ6UX53 244 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 SKA3Q8IX90 412 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 KLHDC8BQ8IXV7 354 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 ARMC10Q8N2F6 343 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 OR5AK3PQ8NH89 298 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 PAQR8Q8TEZ7 354 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 PSMG2Q969U7 264 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 ARHGAP9Q9BRR9 750 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 NPDC1Q9NQX5 325 aaPredicted RBP14.09□□□□□ -0.15
VLDLR-202ENST00000382099 CTPS2Q9NRF8 586 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 GFOD1Q9NXC2 390 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 WASF3Q9UPY6 502 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 ENPP4Q9Y6X5 453 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 USP34Q70CQ2 3546 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 TMEM229AB2RXF0 380 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 AQP8O94778 261 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 MBP02144 154 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 PITPNAQ00169 270 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 ZNF33AQ06730 810 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 SREBF2Q12772 1141 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 SLC25A35Q3KQZ1 300 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 ARL9Q6T311 187 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 DPPA4Q7L190 304 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 GLT6D1Q7Z4J2 308 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 ASPGQ86U10 573 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 LRRTM1Q86UE6 522 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 FBXO15Q8NCQ5 510 aaPredicted RBP14.09□□□□□ -0.15
VLDLR-202ENST00000382099 SKA2Q8WVK7 121 aaPredicted RBP14.09□□□□□ -0.15
VLDLR-202ENST00000382099 ORAI3Q9BRQ5 295 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 DUSP26Q9BV47 211 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 PCDHB9Q9Y5E1 797 aa14.09□□□□□ -0.15
VLDLR-202ENST00000382099 LOC390937A0A1W2PQ73 354 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 RAD1O60671 282 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 EFCAB14O75071 495 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 ADAP00813 363 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 LIMS3P0CW19 117 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 LIMS4P0CW20 117 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 EDNRBP24530 442 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 DLX5P56178 289 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 ILKQ13418 452 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 GAB1Q13480 694 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 CLEC12AQ5QGZ9 265 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 PTRHD1Q6GMV3 140 aaKnown RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 ACSM5Q6NUN0 579 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 CDPF1Q6NVV7 123 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 NOXRED1Q6NXP6 359 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 RHOUQ7L0Q8 258 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 OR2W3Q7Z3T1 314 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 TRIM46Q7Z4K8 759 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 DMBX1Q8NFW5 382 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 HMCESQ96FZ2 354 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 CNTNAP3BQ96NU0 1288 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 UBL7Q96S82 380 aaPredicted RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 EDEM2Q9BV94 578 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 TMPRSS13Q9BYE2 586 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 TOLLIPQ9H0E2 274 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 PPP4R1LQ9P1A2 415 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 STOX2Q9P2F5 926 aaPredicted RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 OPN4Q9UHM6 478 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 A0A1B0GUH1 482 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 YY2O15391 372 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 BRINP1O60477 761 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 CLDN9O95484 217 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 ATXN1LP0C7T5 689 aaKnown RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 UBBP0CG47 229 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 UBCP0CG48 685 aaKnown RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 PRPS1L1P21108 318 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 PCGF2P35227 344 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 SOAT1P35610 550 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 XCR1P46094 333 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 RPS27AP62979 156 aaKnown RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 UBA52P62987 128 aaKnown RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 ZNF852Q6ZMS4 543 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 SYT9Q86SS6 491 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 ZNF546Q86UE3 836 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 MISPQ8IVT2 679 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 OR5T3Q8NGG3 340 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 OR51Q1Q8NH59 317 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 TMEM121BQ9BXQ6 578 aaPredicted RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 SPATC1LQ9H0A9 340 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 TMPRSS5Q9H3S3 457 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 HRASLSQ9HDD0 168 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 MEPEQ9NQ76 525 aaPredicted RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 A0A0G2JMZ2 1700 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 LRRC37A2A6NM11 1700 aa14.08□□□□□ -0.16
VLDLR-202ENST00000382099 PRRC2BQ5JSZ5 2229 aaKnown RBP14.08□□□□□ -0.16
VLDLR-202ENST00000382099 A0A0A6YYC8 382 aaPredicted RBP14.07□□□□□ -0.16
VLDLR-202ENST00000382099 TMEM129A0AVI4 362 aa14.07□□□□□ -0.16
VLDLR-202ENST00000382099 I3L1I5 382 aaPredicted RBP14.07□□□□□ -0.16
VLDLR-202ENST00000382099 TAPBPO15533 448 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms