RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 H3BML4 177 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 LSM1O15116 133 aaKnown RBP11.69□□□□□ -0.54
RPAIN-202ENST00000381208 SEC14L5O43304 696 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 AKAP10O43572 662 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 LYPLA1O75608 230 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-202ENST00000381208 KRT16P08779 473 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 ALOX5P09917 674 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 POU2F1P14859 743 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 PRKAG1P54619 331 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 TMEM44Q2T9K0 475 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 GRAMD1BQ3KR37 738 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 PDSS1Q5T2R2 415 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 MFSD12Q6NUT3 480 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 SZRD1Q7Z422 152 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 DDIASQ8IXT1 998 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 GTPBP8Q8N3Z3 284 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-202ENST00000381208 FAM110BQ8TC76 370 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 FIG4Q92562 907 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 SLC9A6Q92581 669 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 CAVIN3Q969G5 261 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 PRRG4Q9BZD6 226 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 UBQLN4Q9NRR5 601 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 DUSP22Q9NRW4 184 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 GLRX2Q9NS18 164 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 GIN1Q9NXP7 522 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 FLRT3Q9NZU0 649 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 PROCRQ9UNN8 238 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 EMC9Q9Y3B6 208 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 TRAF6Q9Y4K3 522 aa11.69□□□□□ -0.54
RPAIN-202ENST00000381208 MAP1AP78559 2803 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-202ENST00000381208 A0A1W2PQD3 144 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 GXYLT2A0PJZ3 443 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 C16orf97H3BN30 126 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 SCDO00767 359 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 KCNK2O95069 426 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 OXSR1O95747 527 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 NUDT17P0C025 328 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 LINC00032P0C843 101 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 BCKDHAP12694 445 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 PPP3CBP16298 524 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 ME2P23368 584 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 EIF1P41567 113 aaKnown RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 KIR2DL2P43627 348 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 ZNF41P51814 821 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 SUCLG1P53597 346 aaKnown RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 CLDN15P56746 228 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 RAC1P63000 192 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 PON3Q15166 354 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 RFTN2Q52LD8 501 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 SHEQ5VZ18 495 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 GTF2IRD2BQ6EKJ0 949 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 VWA1Q6PCB0 445 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 FAM214BQ7L5A3 538 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 BTLAQ7Z6A9 289 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 GTF2IRD2Q86UP8 949 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 COX18Q8N8Q8 333 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 BANPQ8N9N5 519 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 OR2T11Q8NH01 316 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 FNDC9Q8TBE3 224 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 TWIST2Q8WVJ9 160 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 PIK3R3Q92569 461 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 PIGTQ969N2 578 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 CIDECQ96AQ7 238 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 STACQ99469 402 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 PRPF18Q99633 342 aaKnown RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 PIP5K1AQ99755 562 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 MED18Q9BUE0 208 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 RTN4RQ9BZR6 473 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 ROPN1BQ9BZX4 212 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 ROPN1Q9HAT0 212 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 ATP6V1HQ9UI12 483 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 MCTS1Q9ULC4 181 aaKnown RBP11.68□□□□□ -0.54
RPAIN-202ENST00000381208 FIS1Q9Y3D6 152 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 NAV3Q8IVL0 2385 aa11.68□□□□□ -0.54
RPAIN-202ENST00000381208 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 TLDC2A0PJX2 215 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 C17orf51A8MQB3 221 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 H3BNH8 94 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ARHGEF9O43307 516 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 IGKV1D-16P01601 117 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 PABPC4LP0CB38 370 aaKnown RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ATP6V1C1P21283 382 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 FPR1P21462 350 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 CRYGSP22914 178 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 UGT2B10P36537 528 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 KCNJ5P48544 419 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 CLDN20P56880 219 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ADAM8P78325 824 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 IFFO1Q0D2I5 559 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 FOXD4Q12950 439 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 LSM12Q3MHD2 195 aaKnown RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 GALNTL6Q49A17 601 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ATP6AP1LQ52LC2 224 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ZNF385BQ569K4 471 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ARL13AQ5H913 290 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-202ENST00000381208 CPTPQ5TA50 214 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 ANKRD26P1Q6NSI1 321 aa11.67□□□□□ -0.54
RPAIN-202ENST00000381208 BHLHB9Q6PI77 547 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms