RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 WNT6Q9Y6F9 365 aa12.97□□□□□ -0.33
SDC1-202ENST00000381150 LRRK1Q38SD2 2015 aa12.97□□□□□ -0.33
SDC1-202ENST00000381150 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 J3QLW9 94 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 FZD7O75084 574 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 RECKO95980 971 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 CISD3P0C7P0 127 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 ZNF19P17023 458 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 PLA1AQ53H76 456 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 C3orf38Q5JPI3 329 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 FAM26EQ8N5C1 309 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 BMPERQ8N8U9 685 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 FBXO15Q8NCQ5 510 aaPredicted RBP12.96□□□□□ -0.33
SDC1-202ENST00000381150 RADILQ96JH8 1075 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 NRTNQ99748 197 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 TREX2Q9BQ50 279 aaPredicted RBP12.96□□□□□ -0.33
SDC1-202ENST00000381150 ARHGAP9Q9BRR9 750 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 FAIM2Q9BWQ8 316 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 ARL6Q9H0F7 186 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 GHITMQ9H3K2 345 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 DLL4Q9NR61 685 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 TRDV1A0A1B0GX56 115 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 SGK494L7N484 410 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 MAGEB4O15481 346 aaPredicted RBP12.96□□□□□ -0.33
SDC1-202ENST00000381150 SPDEFO95238 335 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 PTHLHP12272 177 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 HSD3B1P14060 373 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 LIMS1P48059 325 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 UBE2MP61081 183 aaKnown RBP12.96□□□□□ -0.33
SDC1-202ENST00000381150 RAB40BQ12829 278 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 PLPP4Q5VZY2 271 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 UBE2Q1Q7Z7E8 422 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 CPOQ8IVL8 374 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 KLHDC8AQ8IYD2 350 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 ZNF433Q8N7K0 673 aaPredicted RBP12.96□□□□□ -0.33
SDC1-202ENST00000381150 HSD17B8Q92506 261 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 KCNJ15Q99712 375 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 AUNIPQ9H7T9 357 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 ZSCAN32Q9NX65 697 aa12.96□□□□□ -0.33
SDC1-202ENST00000381150 SLC5A10A0PJK1 596 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 PDCD5O14737 125 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 UGDHO60701 494 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 MMP20O60882 483 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 RB1P06400 928 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 UCHL1P09936 223 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 VASPP50552 380 aaPredicted RBP12.96□□□□□ -0.34
SDC1-202ENST00000381150 TBPL1P62380 186 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 KCNC3Q14003 757 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 OCLNQ16625 522 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 C11orf88Q6PI97 169 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 TMEM107Q6UX40 140 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 DPPA4Q7L190 304 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 CFAP206Q8IYR0 622 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 ORAI1Q96D31 301 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 WDR89Q96FK6 387 aaPredicted RBP12.96□□□□□ -0.34
SDC1-202ENST00000381150 TMEM38AQ9H6F2 299 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 LIN7BQ9HAP6 207 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 IL23AQ9NPF7 189 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 FZD3Q9NPG1 666 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 NTNG1Q9Y2I2 539 aa12.96□□□□□ -0.34
SDC1-202ENST00000381150 EXOSC1Q9Y3B2 195 aaKnown RBP12.96□□□□□ -0.34
SDC1-202ENST00000381150 SPTBP11277 2137 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 OR5F1O95221 314 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 FGF19O95750 216 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 CFL1P23528 166 aaKnown RBP12.95□□□□□ -0.34
SDC1-202ENST00000381150 PPP2R1BP30154 601 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 RECQLP46063 649 aaPredicted RBP12.95□□□□□ -0.34
SDC1-202ENST00000381150 TAP2Q03519 686 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 DSG2Q14126 1118 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 HYAL4Q2M3T9 481 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 ZNF805Q5CZA5 627 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 PIP5KL1Q5T9C9 394 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 GRHL2Q6ISB3 625 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 CDC73Q6P1J9 531 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 OR5M3Q8NGP4 307 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 PRDM9Q9NQV7 894 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 PCDHB16Q9NRJ7 776 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 ZCCHC3Q9NUD5 404 aaKnown RBP12.95□□□□□ -0.34
SDC1-202ENST00000381150 ATPIF1Q9UII2 106 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 ARPC1BO15143 372 aaKnown RBP12.95□□□□□ -0.34
SDC1-202ENST00000381150 CBX7O95931 251 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 PCSK2P16519 638 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 MMP12P39900 470 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 ZNF33BQ06732 778 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 CAMK1Q14012 370 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 MELKQ14680 651 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 LASP1Q14847 261 aaKnown RBP12.95□□□□□ -0.34
SDC1-202ENST00000381150 ARHGAP15Q53QZ3 475 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 NLRC3Q7RTR2 1065 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 COMTD1Q86VU5 262 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 TRAPPC5Q8IUR0 188 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 SPPL3Q8TCT6 385 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 TRMT61BQ9BVS5 477 aaKnown RBP12.95□□□□□ -0.34
SDC1-202ENST00000381150 C11orf49Q9H6J7 331 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 TEX10Q9NXF1 929 aaPredicted RBP12.95□□□□□ -0.34
SDC1-202ENST00000381150 TESQ9UGI8 421 aaKnown RBP12.95□□□□□ -0.34
SDC1-202ENST00000381150 IL36AQ9UHA7 158 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 PHF11Q9UIL8 331 aa12.95□□□□□ -0.34
SDC1-202ENST00000381150 RCE1Q9Y256 329 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms