RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PELOQ9BRX2 385 aaKnown RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 RAB33BQ9H082 229 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 MMP27Q9H306 513 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 AKIP1Q9NQ31 210 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 CTPS2Q9NRF8 586 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 TMEM74BQ9NUR3 256 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 DNAJC27Q9NZQ0 273 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 FBXO4Q9UKT5 387 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 PLCL2Q9UPR0 1127 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 PKD1L2Q7Z442 2459 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 IGF2RP11717 2491 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 TLCD2A6NGC4 264 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 CLDN4O14493 209 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 PRODHO43272 600 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 KLF4O43474 513 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 FRS3O43559 492 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 TLX2O43763 284 aaPredicted RBP9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 PRKYO43930 277 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 GDF9O60383 454 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 FOXD2O60548 495 aaPredicted RBP9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 CTNSO60931 367 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 WNT1P04628 370 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 SCG5P05408 212 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 ENDOUP21128 410 aaKnown RBP9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 GALNSP34059 522 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 OPRL1P41146 370 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF136P52737 540 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 MLLT10P55197 1068 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 HNRNPKP61978 463 aaKnown RBP eCLIP9.73□□□□□ -0.852e-10■■■■■ 34.2
POLR2J3-201ENST00000379340 ID2Q02363 134 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 RAB40BQ12829 278 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 FZD5Q13467 585 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 GAS6Q14393 721 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 MED22Q15528 200 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 SNAPC1Q16533 368 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 SYT14P1Q58G82 188 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 RPL13AP3Q6NVV1 102 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 OGFOD3Q6PK18 319 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF438Q7Z4V0 828 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 TMEFF1Q8IYR6 380 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 CAMKK1Q8N5S9 505 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 FAM160A2Q8N612 972 aaPredicted RBP9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 FRMD1Q8N878 549 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 C7orf57Q8NEG2 295 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 OR9Q1Q8NGQ5 310 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 OR9A4Q8NGU2 314 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 RLN3Q8WXF3 142 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 FGF11Q92914 225 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF582Q96NG8 517 aaPredicted RBP9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 GPA33Q99795 319 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 TAPBPLQ9BX59 468 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 TBCCD1Q9NVR7 557 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 IL20Q9NYY1 176 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 TMEM5Q9Y2B1 443 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 LSM2Q9Y333 95 aaKnown RBP9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 CDH10Q9Y6N8 788 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 FRYQ5TBA9 3013 aa9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 GOLGA4Q13439 2230 aaKnown RBP9.73□□□□□ -0.85
POLR2J3-201ENST00000379340 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 CDHR4A6H8M9 788 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 KDM4EB2RXH2 506 aaPredicted RBP9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 LMO7DNF2Z398 122 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 MYL12BO14950 172 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 AQP9O43315 295 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 CBX7O95931 251 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 HMGN1P05114 100 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 CT62P0C5K7 136 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 MLLT3P42568 568 aaPredicted RBP9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 GABRA4P48169 554 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 LIMK1P53667 647 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 PSMD4P55036 377 aaKnown RBP9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 NXPH1P58417 271 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 STX4Q12846 297 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 MLLT11Q13015 90 aaPredicted RBP9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 DEFB110Q30KQ9 67 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF404Q494X3 552 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 MINDY4Q4G0A6 757 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 C3orf38Q5JPI3 329 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 ACSM5Q6NUN0 579 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 TUBA3EQ6PEY2 450 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 Q6ZNX1 250 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 GRAMD2AQ8IUY3 354 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 NKAIN4Q8IVV8 208 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 IQCF1Q8N6M8 205 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 TMCO5AQ8N6Q1 288 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 NANOGP1Q8N7R0 232 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 OIT3Q8WWZ8 545 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 RPL3LQ92901 407 aaKnown RBP9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 RFKQ969G6 155 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 PPP1R14BQ96C90 147 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 FAM46AQ96IP4 442 aaKnown RBP9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 SPACA7Q96KW9 195 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 LRR1Q96L50 414 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 HS6ST2Q96MM7 605 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 MAP3K3Q99759 626 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF559Q9BR84 538 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 SLIRPQ9GZT3 109 aaKnown RBP9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 NXF2Q9GZY0 626 aaKnown RBP9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 EGLN3Q9H6Z9 239 aa9.72□□□□□ -0.85
POLR2J3-201ENST00000379340 SIAEQ9HAT2 523 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms