RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 NPIPA3F8WFD2 350 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 PGFP49763 221 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 ACTBP60709 375 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 HERV-K104P61576 105 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 ACTG1P63261 375 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 RAB11BQ15907 218 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 LEXMQ3ZCV2 418 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 TP53I3Q53FA7 332 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 ALG10Q5BKT4 473 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 AFMIDQ63HM1 303 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 SFRP4Q6FHJ7 346 aaPredicted RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 HMBOX1Q6NT76 420 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 TMEM53Q6P2H8 277 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 MEX3DQ86XN8 651 aaKnown RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 UBQLNLQ8IYU4 475 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 WFDC5Q8TCV5 224 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 ELP5Q8TE02 316 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 KLHL15Q96M94 604 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 UBQLN2Q9UHD9 624 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 CCL26Q9Y258 94 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 GLI3P10071 1580 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 SCN7AQ01118 1682 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 A0A0A6YYC8 382 aaPredicted RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 HIDE1A8MVS5 230 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 I3L1I5 382 aaPredicted RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 TNFSF8P32971 234 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 GJA4P35212 333 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 NKX2-5P52952 324 aaPredicted RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 TSPAN31Q12999 210 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 RNASE10Q5GAN6 216 aaKnown RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 DLEU7Q6UYE1 221 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 ZNF852Q6ZMS4 543 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 OR5J2Q8NH18 312 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 SLC22A8Q8TCC7 542 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 EVA1AQ9H8M9 152 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 PSORS1C1Q9UIG5 152 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 ACP2P11117 423 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 PTGS2P35354 604 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 SLC6A8P48029 635 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 NKX3-2P78367 333 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 PLEKHN1Q494U1 663 aaPredicted RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 SPIN3Q5JUX0 258 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 PIP5KL1Q5T9C9 394 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 LRRC56Q8IYG6 542 aaPredicted RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 FAM3CQ92520 227 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 PMM1Q92871 262 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 ARRDC3Q96B67 414 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 MRI1Q9BV20 369 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 TPSD1Q9BZJ3 242 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 NKX2-4Q9H2Z4 354 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 BABAM2Q9NXR7 383 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 FBXL3Q9UKT7 428 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 RARRES3Q9UL19 164 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 KCNIP3Q9Y2W7 256 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 COL16A1Q07092 1604 aaPredicted RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 PRSS38A1L453 326 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 CTDSP2O14595 271 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 LDB3O75112 727 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 F3P13726 295 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 CPMP14384 443 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 CHRNEQ04844 493 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 ENTPD8Q5MY95 495 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 TMEM205Q6UW68 189 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 VRK2Q86Y07 508 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 CCDC28AQ8IWP9 274 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 SLC35F2Q8IXU6 374 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 C1QTNF3Q9BXJ4 246 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 MEPEQ9NQ76 525 aaPredicted RBP10.61□□□□□ -0.71
RPGR-203ENST00000378505 KLK4Q9Y5K2 254 aa10.61□□□□□ -0.71
RPGR-203ENST00000378505 PHIPQ8WWQ0 1821 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 NPIPA5A0A0B4J1W7 369 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 NPIPA7E9PJI5 369 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 SCGB1D2O95969 90 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ZDHHC11BP0C7U3 371 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 NPIPA8P0DM63 369 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 PFN3P60673 137 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 SF3A2Q15428 464 aaKnown RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 RPE65Q16518 533 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ACSM3Q53FZ2 586 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 DGLUCYQ7Z3D6 616 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 MCATQ8IVS2 390 aaKnown RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 C17orf50Q8WW18 174 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 PGAM5Q96HS1 289 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 WDR77Q9BQA1 342 aaPredicted RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 MS4A8Q9BY19 250 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ZNF717Q9BY31 904 aaPredicted RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 ARL6Q9H0F7 186 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 INPP5EQ9NRR6 644 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 MRPL15Q9P015 296 aaKnown RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 SLC35A3Q9Y2D2 325 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 TRBV4-1A0A0J9YWV2 114 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 CENPBD1B2RD01 187 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 SGK494L7N484 410 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 OR2T1O43869 369 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 AIFM1O95831 613 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 GASTP01350 101 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 DRD5P21918 477 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ADARB1P78563 741 aaKnown RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 CDNFQ49AH0 187 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 BCL2L15Q5TBC7 163 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms