RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GANABQ14697 944 aaKnown RBP12.07□□□□□ -0.48
CKAP2-202ENST00000378034 TRMT5Q32P41 509 aaKnown RBP12.07□□□□□ -0.48
CKAP2-202ENST00000378034 TYW3Q6IPR3 259 aaKnown RBP12.07□□□□□ -0.48
CKAP2-202ENST00000378034 TRILQ7L0X0 811 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 ZNF619Q8N2I2 560 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 METTL25Q8N6Q8 603 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 OR4K17Q8NGC6 315 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 PTGES2Q9H7Z7 377 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 MTHFD2LQ9H903 347 aaPredicted RBP12.07□□□□□ -0.48
CKAP2-202ENST00000378034 SUCOQ9UBS9 1254 aaKnown RBP12.07□□□□□ -0.48
CKAP2-202ENST00000378034 MKLN1Q9UL63 735 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 TRGV5A0A0B4J1U4 118 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 LOC100653049A0A140TA62 436 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 OR14I1A6ND48 311 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 MRASO14807 208 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 CDC40O60508 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
CKAP2-202ENST00000378034 TNFRSF21O75509 655 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 TRAPPC6AO75865 159 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 DCTN3O75935 186 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 KRT34O76011 436 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 WISP2O76076 250 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 H6PDO95479 791 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 TFPTP0C1Z6 253 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 ADH7P40394 386 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 DSCR4P56555 118 aaPredicted RBP12.06□□□□□ -0.48
CKAP2-202ENST00000378034 MRPL49Q13405 166 aaKnown RBP12.06□□□□□ -0.48
CKAP2-202ENST00000378034 GPR68Q15743 365 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 SYPL1Q16563 259 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 ZNF630Q2M218 657 aaPredicted RBP12.06□□□□□ -0.48
CKAP2-202ENST00000378034 GKAP1Q5VSY0 366 aaPredicted RBP12.06□□□□□ -0.48
CKAP2-202ENST00000378034 PRAMEF8Q5VWM4 474 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 PRAMEF7Q5VXH5 474 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 REP15Q6BDI9 236 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 FRRS1Q6ZNA5 592 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 ANKFN1Q8N957 763 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 OR2M3Q8NG83 312 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 SH3GL1Q99961 368 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 CPPED1Q9BRF8 314 aaPredicted RBP12.06□□□□□ -0.48
CKAP2-202ENST00000378034 RTN4RQ9BZR6 473 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 OR2B2Q9GZK3 357 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 LDAHQ9H6V9 325 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 A4GALTQ9NPC4 353 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 GID8Q9NWU2 228 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 ZNF835Q9Y2P0 537 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 NCKAP5O14513 1909 aa12.06□□□□□ -0.48
CKAP2-202ENST00000378034 AQP7O14520 342 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 UGT2B17O75795 530 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 CELA3AP09093 270 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 COX4I1P13073 169 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 PRDX6P30041 224 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 GCKP35557 465 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 CRISP3P54108 245 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 CHRNEQ04844 493 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 TOMM20Q15388 145 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 Q6ZPB1 254 aaPredicted RBP12.05□□□□□ -0.48
CKAP2-202ENST00000378034 SPPL2CQ8IUH8 684 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 NEIL3Q8TAT5 605 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 SLC38A5Q8WUX1 472 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 CMTM5Q96DZ9 223 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 SLC38A1Q9H2H9 487 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 DSN1Q9H410 356 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 FBXL2Q9UKC9 423 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 NPIPA5A0A0B4J1W7 369 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 A0A0G2JPF8 293 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 A0A1B0GTH9 108 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 SERINC4A6NH21 518 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 HNRNPCL2B2RXH8 293 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 HNRNPCL3B7ZW38 293 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 NPIPA7E9PJI5 369 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 HNRNPCL1O60812 293 aaKnown RBP12.05□□□□□ -0.48
CKAP2-202ENST00000378034 PDE9AO76083 593 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 ZIC2O95409 532 aaPredicted RBP12.05□□□□□ -0.48
CKAP2-202ENST00000378034 CHRM4P08173 479 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 NPIPA8P0DM63 369 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 HNRNPCL4P0DMR1 293 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 PTGS2P35354 604 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 GLYR1Q49A26 553 aaPredicted RBP12.05□□□□□ -0.48
CKAP2-202ENST00000378034 NHSL2Q5HYW2 709 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 PDZK1Q5T2W1 519 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 GCNT6Q5T4J0 391 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 OR5M10Q6IEU7 315 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 CHERPQ8IWX8 916 aaKnown RBP12.05□□□□□ -0.48
CKAP2-202ENST00000378034 FAM83FQ8NEG4 500 aaPredicted RBP12.05□□□□□ -0.48
CKAP2-202ENST00000378034 PHOSPHO1Q8TCT1 267 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 SARAFQ96BY9 339 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 LRRC58Q96CX6 371 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 THUMPD3Q9BV44 507 aaKnown RBP12.05□□□□□ -0.48
CKAP2-202ENST00000378034 TMEM38AQ9H6F2 299 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 EXO5Q9H790 373 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 BCL2L10Q9HD36 194 aa12.05□□□□□ -0.48
CKAP2-202ENST00000378034 A0A087WZY1 265 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 BCKDKO14874 412 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 EIF4E2O60573 245 aaKnown RBP12.04□□□□□ -0.48
CKAP2-202ENST00000378034 SLC19A2O60779 497 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 BCHEP06276 602 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 STSP08842 583 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 ABOP16442 354 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 DPP4P27487 766 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 UQCRFS1P47985 274 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 CASP6P55212 293 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms