RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 CER1O95813 267 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 CHMP24386 653 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 PPP2R2BQ00005 443 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 ZNF829Q3KNS6 432 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-202ENST00000377797 HMGCLL1Q8TB92 370 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 KIAA1143Q96AT1 154 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-202ENST00000377797 TCEAL2Q9H3H9 227 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-202ENST00000377797 SESN1Q9Y6P5 492 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 BLACEA4D250 179 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 ASPDHA6ND91 283 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 PPP1R3DO95685 299 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 ITIH1P19827 911 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 MAP3K8P41279 467 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 SNTA1Q13424 505 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 TRIM61Q5EBN2 209 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 GARNL3Q5VVW2 1013 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 NLGN4XQ8N0W4 816 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 MRPL39Q9NYK5 338 aaKnown RBP13.56□□□□□ -0.24
TCOF1-202ENST00000377797 CTNSO60931 367 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 ENTPD6O75354 484 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 UBL4AP11441 157 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 FUT1P19526 365 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 C21orf33P30042 268 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-202ENST00000377797 CTXN1P60606 82 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 TRMT12Q53H54 448 aaKnown RBP13.56□□□□□ -0.24
TCOF1-202ENST00000377797 TMEM64Q6YI46 380 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 KLBQ86Z14 1044 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 B3GNT7Q8NFL0 401 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 NSMAFQ92636 917 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 SLC6A20Q9NP91 592 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 UBQLN4Q9NRR5 601 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 METTL12A8MUP2 240 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 PDCD5O14737 125 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 SSTR4P31391 388 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 CXCR4P61073 352 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 NFATC3Q12968 1075 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 OR1Q1Q15612 314 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 ZNF791Q3KP31 576 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-202ENST00000377797 CCDC80Q76M96 950 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 ASB12Q8WXK4 309 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 AMBRA1Q9C0C7 1298 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 LYRM4Q9HD34 91 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 SLC35A3Q9Y2D2 325 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 SNX11Q9Y5W9 270 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 CACNA1CQ13936 2221 aa13.56□□□□□ -0.24
TCOF1-202ENST00000377797 KCNE1BA0A087WTH5 132 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 VSTM2BA6NLU5 285 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 ZNF879B4DU55 563 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 TAF4O00268 1085 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 WWP2O00308 870 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 FMO6PO60774 539 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 KIR2DL1P43626 348 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-202ENST00000377797 PPP1R14AQ96A00 147 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 SLC6A13Q9NSD5 602 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 SCRG1O75711 98 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 WISP3O95389 354 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-202ENST00000377797 HTR1AP08908 422 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 C4BPBP20851 252 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 PDX1P52945 283 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 ACTC1P68032 377 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 ACTA1P68133 377 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 APOFQ13790 326 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 FCRLBQ6BAA4 426 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 ULK3Q6PHR2 472 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 BAIAP2Q9UQB8 552 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 EIF1AYO14602 144 aaKnown RBP13.55□□□□□ -0.24
TCOF1-202ENST00000377797 KIAA0513O60268 411 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 ZP2Q05996 745 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 PLEKHG7Q6ZR37 379 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 LINC01555Q8NAE3 123 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 NEIL3Q8TAT5 605 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 PRR14Q9BWN1 585 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 MMP27Q9H306 513 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 CDH10Q9Y6N8 788 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 MYO16Q9Y6X6 1858 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 PLGP00747 810 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-202ENST00000377797 PRKCAP17252 672 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 E2F2Q14209 437 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 SAXO2Q658L1 398 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 PLAG1Q6DJT9 500 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 B3GNT8Q7Z7M8 397 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 BMFQ96LC9 184 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 OR52D1Q9H346 318 aa13.55□□□□□ -0.24
TCOF1-202ENST00000377797 PTRH2Q9Y3E5 179 aaKnown RBP13.55□□□□□ -0.24
TCOF1-202ENST00000377797 SPARCP09486 303 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 MAOAP21397 527 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 EMX1Q04741 257 aaPredicted RBP13.54□□□□□ -0.24
TCOF1-202ENST00000377797 HNRNPA0Q13151 305 aaKnown RBP13.54□□□□□ -0.24
TCOF1-202ENST00000377797 C22orf42Q6IC83 251 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 MAMDC2Q7Z304 686 aaPredicted RBP13.54□□□□□ -0.24
TCOF1-202ENST00000377797 RAB43Q86YS6 212 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 AGBL5Q8NDL9 886 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 CAPSLQ8WWF8 208 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 DUS3LQ96G46 650 aaKnown RBP13.54□□□□□ -0.24
TCOF1-202ENST00000377797 OR10A5Q9H207 317 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 PRODHO43272 600 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 NR2C1P13056 603 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 GADD45AP24522 165 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 PIGAP37287 484 aa13.54□□□□□ -0.24
TCOF1-202ENST00000377797 KIAA0907Q7Z7F0 614 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms