RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 ATG13O75143 517 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 RPLP2P05387 115 aaKnown RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 TAGLN2P37802 199 aaKnown RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 PITPNBP48739 271 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 SELENOPP49908 381 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 SMIM11AP58511 58 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 FUT5Q11128 374 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 COL28A1Q2UY09 1125 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 HENMT1Q5T8I9 393 aaKnown RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 PIP5KL1Q5T9C9 394 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 HIST2H2AA3Q6FI13 130 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 SIAH3Q8IW03 269 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 KLHL36Q8N4N3 616 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 ZBTB44Q8NCP5 570 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 RIT1Q92963 219 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 WDR34Q96EX3 536 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 C12orf66Q96MD2 445 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 TIMP4Q99727 224 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 RBCK1Q9BYM8 510 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 MED20Q9H944 212 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 CUEDC1Q9NWM3 386 aaPredicted RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 ADAM30Q9UKF2 790 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 PPIEQ9UNP9 301 aaKnown RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 CHST2Q9Y4C5 530 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 KCNE3Q9Y6H6 103 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 PLXNA2O75051 1894 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 E9PI62 339 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 SOX30O94993 753 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 HPXP02790 462 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 MT-ND4P03905 459 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 HOXD4P09016 255 aaPredicted RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 XPAP23025 273 aaPredicted RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 GPR4P46093 362 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 MAP2K6P52564 334 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 PCBP4P57723 403 aaKnown RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 DGCR2P98153 550 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 CLLU1Q5K131 121 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 ZNF425Q6IV72 752 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 KIAA1211LQ6NV74 962 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 LIPIQ6XZB0 460 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 KANSL1Q7Z3B3 1105 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 MS4A15Q8N5U1 240 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 OR51G2Q8NGK0 314 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 FIBINQ8TAL6 211 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 ASB12Q8WXK4 309 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 MARC2Q969Z3 335 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 FCRL4Q96PJ5 515 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 UBL7Q96S82 380 aaPredicted RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 SGPP1Q9BX95 441 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 DLL4Q9NR61 685 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 SEMA4GQ9NTN9 838 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 SLC9A8Q9Y2E8 581 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 FEZF1A0PJY2 475 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 OR6C74A6NCV1 312 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 STATHP02808 62 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 RRASP10301 218 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 DRD5P21918 477 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 GDPD4Q6W3E5 623 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 RTL4Q6ZR62 310 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 NUP54Q7Z3B4 507 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 SYT9Q86SS6 491 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 OAFQ86UD1 273 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 GPALPP1Q8IXQ4 340 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 AUTS2Q8WXX7 1259 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 SORCS1Q8WY21 1168 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 CHFRQ96EP1 664 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 TOE1Q96GM8 510 aaKnown RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 LINC00052Q96N35 136 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 FOPNLQ96NB1 174 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 MS4A7Q9GZW8 240 aaPredicted RBP10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 ASB4Q9Y574 426 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 C5orf42Q9H799 3197 aa10.75□□□□□ -0.69
TM9SF2-201ENST00000376387 TCF20Q9UGU0 1960 aaKnown RBP10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 MANSC4A6NHS7 340 aaPredicted RBP10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 GLOD5A6NK44 160 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 TEX46H3BTG2 121 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 SURF4O15260 269 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 TMPRSS11DO60235 418 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 DNASE1P24855 282 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 TRHRP34981 398 aaPredicted RBP10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 PRLHRP49683 370 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 CASP6P55212 293 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 GPNMBQ14956 572 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 ZMYND11Q15326 602 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 ZNF750Q32MQ0 723 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 PRSS42Q7Z5A4 293 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 MRGPREQ86SM8 312 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 LRRC28Q86X40 367 aaPredicted RBP10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 ZNF461Q8TAF7 563 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 SOCS4Q8WXH5 440 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 WBP1Q96G27 269 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 LMLNQ96KR4 655 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 ZFP3Q96NJ6 502 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 SLC38A2Q96QD8 506 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 DPAGT1Q9H3H5 408 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 LHX9Q9NQ69 397 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 MRPL15Q9P015 296 aaKnown RBP10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 UBQLN2Q9UHD9 624 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 CBLCQ9ULV8 474 aa10.74□□□□□ -0.69
TM9SF2-201ENST00000376387 COL4A3Q01955 1670 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms