RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 CFAP157Q5JU67 520 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 FRMD7Q6ZUT3 714 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 EXOC3L1Q86VI1 746 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 CIARTQ8N365 385 aaPredicted RBP20.8■□□□□ 0.92
C9orf47-202ENST00000375850 OR6Y1Q8NGX8 325 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 OR10D3Q8NH80 312 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 ZBED6CLQ96FA7 236 aaPredicted RBP20.8■□□□□ 0.92
C9orf47-202ENST00000375850 NTMQ9P121 344 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 VDAC3Q9Y277 283 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 GPR52Q9Y2T5 361 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 GOLGA8RI6L899 631 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 KLF4O43474 513 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 TBX19O60806 448 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 HSPA4LO95757 839 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 PABPC4LP0CB38 370 aaKnown RBP20.79■□□□□ 0.92
C9orf47-202ENST00000375850 DDX5P17844 614 aaKnown RBP20.79■□□□□ 0.92
C9orf47-202ENST00000375850 ZNF41P51814 821 aaPredicted RBP20.79■□□□□ 0.92
C9orf47-202ENST00000375850 DNAJB13P59910 316 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 CCDC153Q494R4 210 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 PPP4R4Q6NUP7 873 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 ZCCHC12Q6PEW1 402 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 APOOLQ6UXV4 268 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 STAC2Q6ZMT1 411 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 ZNF704Q6ZNC4 412 aaPredicted RBP20.79■□□□□ 0.92
C9orf47-202ENST00000375850 IGFBPL1Q8WX77 278 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 ADGRG7Q96K78 797 aa20.79■□□□□ 0.92
C9orf47-202ENST00000375850 ZNF701Q9NV72 531 aaPredicted RBP20.79■□□□□ 0.92
C9orf47-202ENST00000375850 FN1P02751 2386 aaKnown RBP20.79■□□□□ 0.92
C9orf47-202ENST00000375850 GXYLT2A0PJZ3 443 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 G3V2L1 256 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 SLC28A1O00337 649 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 SMAD7O15105 426 aaKnown RBP20.78■□□□□ 0.92
C9orf47-202ENST00000375850 SEC22BO75396 215 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 CNOT4O95628 575 aaKnown RBP20.78■□□□□ 0.92
C9orf47-202ENST00000375850 IGKV1D-16P01601 117 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 THBDP07204 575 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 HPGDP15428 266 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 PSMB1P20618 241 aaKnown RBP20.78■□□□□ 0.92
C9orf47-202ENST00000375850 HSPB3Q12988 150 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 CPTPQ5TA50 214 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 ANKRD34AQ69YU3 496 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 ZNF551Q7Z340 670 aaPredicted RBP20.78■□□□□ 0.92
C9orf47-202ENST00000375850 IFT20Q8IY31 132 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 ZNF611Q8N823 705 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 OR2V1Q8NHB1 315 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 PIK3R3Q92569 461 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 MS4A4EQ96PG1 132 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 CCT7Q99832 543 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 EQTNQ9NQ60 294 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 UBQLN4Q9NRR5 601 aa20.78■□□□□ 0.92
C9orf47-202ENST00000375850 ACSS1Q9NUB1 689 aaPredicted RBP20.78■□□□□ 0.92
C9orf47-202ENST00000375850 TRIM64A6NGJ6 449 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 TRIM64BA6NI03 449 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 RGS14O43566 566 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 OXSR1O95747 527 aaPredicted RBP20.77■□□□□ 0.92
C9orf47-202ENST00000375850 TUBBP07437 444 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 EIF1P41567 113 aaKnown RBP20.77■□□□□ 0.92
C9orf47-202ENST00000375850 SLC6A8P48029 635 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 SERPINB4P48594 390 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 KIAA0040Q15053 153 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 CTU2Q2VPK5 515 aaKnown RBP20.77■□□□□ 0.92
C9orf47-202ENST00000375850 RNF165Q6ZSG1 346 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 C22orf34Q6ZV56 151 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 FAM110BQ8TC76 370 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 PPCDCQ96CD2 204 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 HDHD5Q9BXW7 423 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 REEP4Q9H6H4 257 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 C1orf109Q9NX04 203 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 EMCNQ9ULC0 261 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 CCL27Q9Y4X3 112 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 SNX8Q9Y5X2 465 aa20.77■□□□□ 0.92
C9orf47-202ENST00000375850 HIVEP2P31629 2446 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 A0A1W2PQD3 144 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 A0A1W2PRB8 838 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 NEFHP12036 1026 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 PSMA4P25789 261 aaKnown RBP20.76■□□□□ 0.91
C9orf47-202ENST00000375850 CCT5P48643 541 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 NUP43Q8NFH3 380 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 STEAP2Q8NFT2 490 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 OR4C3Q8NH37 302 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 MZB1Q8WU39 189 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 SLC9A6Q92581 669 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 EGLN2Q96KS0 407 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 TMEM204Q9BSN7 226 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 ACTR6Q9GZN1 396 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 LRTM1Q9HBL6 345 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 TIGARQ9NQ88 270 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 MED17Q9NVC6 651 aa20.76■□□□□ 0.91
C9orf47-202ENST00000375850 SHISA8B8ZZ34 492 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 SCDO00767 359 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 HS3ST1O14792 307 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 CXCL13O43927 109 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 GMFGO60234 142 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 PROCP04070 461 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 ELK4P28324 431 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 PCSK6P29122 969 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 FRKP42685 505 aaPredicted RBP20.75■□□□□ 0.91
C9orf47-202ENST00000375850 MANFP55145 182 aaKnown RBP20.75■□□□□ 0.91
C9orf47-202ENST00000375850 SLC18A2Q05940 514 aa20.75■□□□□ 0.91
C9orf47-202ENST00000375850 PLPPR5Q32ZL2 321 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms