RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 E2F1Q01094 437 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ALG10BQ5I7T1 473 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ARL14Q8N4G2 192 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 PTCHD1Q96NR3 888 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 CACNG6Q9BXT2 260 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 NPAP1Q9NZP6 1156 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 SH2B3Q9UQQ2 575 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 CSTAP01040 98 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 EPCAMP16422 314 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 DCST2Q5T1A1 773 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ARHGAP11AQ6P4F7 1023 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 CSNK1A1LQ8N752 337 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 CHTF18Q8WVB6 975 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 MMABQ96EY8 250 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-202ENST00000375340 CSF3RQ99062 836 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ARL6Q9H0F7 186 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 TAS2R3Q9NYW6 316 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 CYP8B1Q9UNU6 501 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 HEPACAM2A8MVW5 462 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 DOK2O60496 412 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 HMGN2P05204 90 aaKnown RBP6.15□□□□□ -1.42
SMC1A-202ENST00000375340 HOXB2P14652 356 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 AKR1C4P17516 323 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 RAB40BQ12829 278 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 NKPD1Q17RQ9 610 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 TMEM35AQ53FP2 167 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 PRR22Q8IZ63 422 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 RIT1Q92963 219 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 TREX2Q9BQ50 279 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-202ENST00000375340 SAV1Q9H4B6 383 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-202ENST00000375340 TAAR2Q9P1P5 351 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 SLC22A31A6NKX4 558 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 GPR89AB7ZAQ6 455 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 WASH3PC4AMC7 463 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 GFRA2O00451 464 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ARPC5O15511 151 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 GPR89BP0CG08 455 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ART1P52961 327 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 CLRN1P58418 232 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 RAB33AQ14088 237 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 RAB11BQ15907 218 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 ZNF740Q8NDX6 193 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 OR5AK2Q8NH90 309 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 SMAP2Q8WU79 429 aaPredicted RBP6.15□□□□□ -1.42
SMC1A-202ENST00000375340 INSL6Q9Y581 213 aa6.15□□□□□ -1.42
SMC1A-202ENST00000375340 TRAPPC13A5PLN9 417 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF705EA8MWA4 302 aaPredicted RBP6.15□□□□□ -1.43
SMC1A-202ENST00000375340 ARAFP10398 606 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 PTH2RP49190 550 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 ACTC1P68032 377 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 ACTA1P68133 377 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 FAM198BQ6UWH4 519 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 HTR3DQ70Z44 454 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 OR2L2Q8NH16 312 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 SGTBQ96EQ0 304 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 TXNDC15Q96J42 360 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 NEDD4LQ96PU5 975 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 DPYSL5Q9BPU6 564 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 SLC39A1Q9NY26 324 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 KLRF1Q9NZS2 232 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 IER3IP1Q9Y5U9 82 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 B4GALT3O60512 393 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 HRGP04196 525 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 FBXO45P0C2W1 286 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 SNRPBP14678 240 aaKnown RBP6.15□□□□□ -1.43
SMC1A-202ENST00000375340 C18orf63Q68DL7 685 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 SLC39A5Q6ZMH5 540 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF836Q6ZNA1 936 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 CFAP77Q6ZQR2 320 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 OR52E1Q8NGJ3 308 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 ACOT12Q8WYK0 555 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 HYLS1Q96M11 299 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 UNCXA6NJT0 531 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM150CB9EJG8 249 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF878C9JN71 531 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM189-UBE2V1I3L0A0 370 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 FXYD1O00168 92 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 FARS2O95363 451 aaKnown RBP6.15□□□□□ -1.43
SMC1A-202ENST00000375340 CD2P06729 351 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 MASP1P48740 699 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 HAGHLQ6PII5 290 aaPredicted RBP6.15□□□□□ -1.43
SMC1A-202ENST00000375340 BAIAP2L2Q6UXY1 529 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 SLC29A4Q7RTT9 530 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 SLC9B2Q86UD5 537 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 FOLH1BQ9HBA9 442 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 PRTFDC1Q9NRG1 225 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 MAN2C1Q9NTJ4 1040 aa6.15□□□□□ -1.43
SMC1A-202ENST00000375340 A0A1B0GV50 99 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 NUPL2O15504 423 aaKnown RBP6.14□□□□□ -1.43
SMC1A-202ENST00000375340 GP1BBP13224 206 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CCKBRP32239 447 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PDX1P52945 283 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CTBP2P56545 445 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 FXYD6P3P58550 94 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CST6Q15828 149 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 CTF1Q16619 201 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 PGGHGQ32M88 737 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 GPAT4Q86UL3 456 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 GPALPP1Q8IXQ4 340 aa6.14□□□□□ -1.43
SMC1A-202ENST00000375340 ACOT4Q8N9L9 421 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms