RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 HSF5Q4G112 596 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 TMEM225Q6GV28 225 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 MTFR2Q6P444 385 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 PELOQ9BRX2 385 aaKnown RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 GPR34Q9UPC5 381 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 IER3IP1Q9Y5U9 82 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 FAM171A2A8MVW0 826 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 TARM1B6A8C7 271 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ADAMTS4O75173 837 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 C1SP09871 688 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 FBXO45P0C2W1 286 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ENDOUP21128 410 aaKnown RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 APEX1P27695 318 aaKnown RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 TSPAN31Q12999 210 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 HNRNPA1L2Q32P51 320 aaKnown RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 METAP1DQ6UB28 335 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 LACC1Q8IV20 430 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 SERPINA12Q8IW75 414 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 BEST4Q8NFU0 473 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 LMX1AQ8TE12 382 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 CPNE2Q96FN4 548 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-203ENST00000375274 SLC46A2Q9BY10 475 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 KCNN3Q9UGI6 736 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 F5P12259 2224 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 EEF1E1-BLOC1S5C9J1V9 151 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ACOT7O00154 380 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 GABRPO00591 440 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ALDOBP05062 364 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 GYPBP06028 91 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 C5AR1P21730 350 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 GABRA5P31644 462 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 PLK5Q496M5 336 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 CLDN22Q8N7P3 220 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 NAXEQ8NCW5 288 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 CASD1Q96PB1 797 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 LMF1Q96S06 567 aa10.86□□□□□ -0.67
PTCH1-203ENST00000375274 ZNF705EA8MWA4 302 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 PGCP20142 388 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ITGB7P26010 798 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ZNF41P51814 821 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 TRA2BP62995 288 aaKnown RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ZMYND11Q15326 602 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 SGCBQ16585 318 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 FAM205BPQ63HN1 556 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 RNF111Q6ZNA4 994 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 SLCO4C1Q6ZQN7 724 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 GALNT11Q8NCW6 608 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 SDR9C7Q8NEX9 313 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 C4orf36Q96KX1 117 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ZFYVE21Q9BQ24 234 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 C7orf50Q9BRJ6 194 aaKnown RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 EGLN3Q9H6Z9 239 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 PTGES2Q9H7Z7 377 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 SLC2A4RGQ9NR83 387 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 TXNL4BQ9NX01 149 aaKnown RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 BOLA1Q9Y3E2 137 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 KIAA0355O15063 1070 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 FUT1P19526 365 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 OC90Q02509 493 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 PLCXD2Q0VAA5 305 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 C1orf189Q5VU69 101 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ZER1Q7Z7L7 766 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 SLC39A11Q8N1S5 342 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 TMEM156Q8N614 296 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ZNF740Q8NDX6 193 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ZDHHC1Q8WTX9 485 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 MRI1Q9BV20 369 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 PITHD1Q9GZP4 211 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 DUSP21Q9H596 190 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 CWH43Q9H720 699 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 TMEM30AQ9NV96 361 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 A0A1W2PPL8 197 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 CPED1A4D0V7 1026 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 PHYHO14832 338 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ERCC1P07992 297 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 MMP2P08253 660 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 SLC10A3P09131 477 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 FURINP09958 794 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 GP2P55259 537 aaKnown RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 HERV-K104P61576 105 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 RUNX3Q13761 415 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 CTU2Q2VPK5 515 aaKnown RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ENTPD8Q5MY95 495 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 LRIF1Q5T3J3 769 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 FAM69AQ5T7M9 428 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 WDR53Q7Z5U6 358 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 GKN2Q86XP6 184 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 VRK2Q86Y07 508 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 SLC35F2Q8IXU6 374 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 Q8N9G6 341 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 OR5T2Q8NGG2 359 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 CD300LFQ8TDQ1 290 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 ADAMTS14Q8WXS8 1223 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 DAZLQ92904 295 aaKnown RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 TSACCQ96A04 125 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-203ENST00000375274 PEX11GQ96HA9 241 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 TXNDC15Q96J42 360 aa10.85□□□□□ -0.67
PTCH1-203ENST00000375274 KATNBL1Q9H079 304 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms