RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 GPR83Q9NYM4 423 aa16.68■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ERVK-19Q9WJR5 959 aa16.68■□□□□ 0.26
HLA-DQB1-201ENST00000374943 DTX4Q9Y2E6 619 aa16.68■□□□□ 0.26
HLA-DQB1-201ENST00000374943 LAMA1P25391 3075 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 IGKV3D-11A0A0A0MRZ8 115 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 NPIPB9F8W1W9 429 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 DSCR3O14972 297 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 YKT6O15498 198 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 GABARAPO95166 117 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 LYPD3O95274 346 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 IGKV1D-16P01601 117 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 MYF5P13349 255 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 FOLR1P15328 257 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 HTR2AP28223 471 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 STAT5AP42229 794 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 GIPRP48546 466 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ST13P50502 369 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 SMSP52788 366 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 SIGLEC14Q08ET2 396 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ZNF141Q15928 474 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 B3GNT7Q8NFL0 401 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 C16orf52Q8NHV5 167 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 SAP25Q8TEE9 199 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PRSS27Q9BQR3 290 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 NDC1Q9BTX1 674 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 G6PC3Q9BUM1 346 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 AMBNQ9NP70 447 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 KRCC1Q9NPI7 259 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PRODH2Q9UF12 536 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 SLC7A7Q9UM01 511 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 MAU2Q9Y6X3 613 aa16.67■□□□□ 0.26
HLA-DQB1-201ENST00000374943 A0A1W2PPW3 197 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 LAMTOR5O43504 91 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 IFNA16P05015 189 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CT45A8P0DMV1 189 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CT45A9P0DMV2 189 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PRG2P13727 222 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 C21orf33P30042 268 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PCYT1AP49585 367 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PSMD4P55036 377 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 EFNB1P98172 346 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ST3GAL4Q11206 333 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 NFATC3Q12968 1075 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 GINS1Q14691 196 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 NR0B2Q15466 257 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 OR1Q1Q15612 314 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CT45A2Q5DJT8 189 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 SNAP47Q5SQN1 464 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 TMEM71Q6P5X7 295 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 STX19Q8N4C7 294 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 FAM26EQ8N5C1 309 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CLDN22Q8N7P3 220 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 POGLUT1Q8NBL1 392 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 TEX47Q8TBZ9 253 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ZNF501Q96CX3 271 aaPredicted RBP16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 FAM46AQ96IP4 442 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 NUDT22Q9BRQ3 303 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 SERTAD3Q9UJW9 196 aa16.66■□□□□ 0.26
HLA-DQB1-201ENST00000374943 LY6G6EA0A0G2JKS1 128 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 OR2W5A6NFC9 320 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ENTPD6O75354 484 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 STSP08842 583 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ANKRD34CP0C6C1 535 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PSMB9P28065 219 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 OR1D4P47884 311 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PDZK1Q5T2W1 519 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 MFSD4BQ5TF39 518 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 MEDAGQ5VYS4 303 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ZNF613Q6PF04 617 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 RNF113BQ8IZP6 322 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 FAM181AQ8N9Y4 354 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 RCBTB1Q8NDN9 531 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 OR4N2Q8NGD1 307 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 TMEM255BQ8WV15 326 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 OIT3Q8WWZ8 545 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 FGF11Q92914 225 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PTCHD1Q96NR3 888 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 IL4I1Q96RQ9 567 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ZNF559Q9BR84 538 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CDCA4Q9BXL8 241 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PLA2G12AQ9BZM1 189 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CAPN10Q9HC96 672 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CNIH4Q9P003 139 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 U3KQA8 63 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 A0A1B0GX78 115 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 FAM86C2PA6NEL3 165 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 C17orf105B2RV13 164 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 LCKP06239 509 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 GKN3PP0CG01 181 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 FBLP22087 321 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ALAS2P22557 587 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PGDP52209 483 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 FGFBP1Q14512 234 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CTF1Q16619 201 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 SLC27A4Q6P1M0 643 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ZC3H14Q6PJT7 736 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 GATAD2AQ86YP4 633 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 NRMQ8IXM6 262 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms