RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MARCH3Q86UD3 253 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 SLC22A16Q86VW1 577 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 MISPQ8IVT2 679 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 WDSUB1Q8N9V3 476 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 OR1J4Q8NGS1 313 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 OR10A6Q8NH74 314 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 NR4A3Q92570 626 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 MAL2Q969L2 176 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 JSRP1Q96MG2 331 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-201ENST00000374673 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 ZNF703Q9H7S9 590 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-201ENST00000374673 BCL2L10Q9HD36 194 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 AGPAT4Q9NRZ5 378 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 ASF1BQ9NVP2 202 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 PPP4R1LQ9P1A2 415 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 SUCOQ9UBS9 1254 aaKnown RBP13.71□□□□□ -0.21
HSPG2-201ENST00000374673 KCNE5Q9UJ90 142 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 AP3M1Q9Y2T2 418 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 DTNAQ9Y4J8 743 aa13.71□□□□□ -0.21
HSPG2-201ENST00000374673 IGLV3-32A0A0A0MS00 114 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 A0A0G2JPF8 293 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 CENPVL1A0A0U1RR11 272 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 HNRNPCL2B2RXH8 293 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 HNRNPCL3B7ZW38 293 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 HNRNPCL1O60812 293 aaKnown RBP13.7□□□□□ -0.22
HSPG2-201ENST00000374673 CBX6O95503 412 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 HNRNPCL4P0DMR1 293 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 RPS4Y1P22090 263 aaKnown RBP13.7□□□□□ -0.22
HSPG2-201ENST00000374673 ADH7P40394 386 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 PPIAP62937 165 aaKnown RBP13.7□□□□□ -0.22
HSPG2-201ENST00000374673 CDK6Q00534 326 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 FGFBP1Q14512 234 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 CYP51A1Q16850 503 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 PDZK1Q5T2W1 519 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 BNC2Q6ZN30 1099 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-201ENST00000374673 CALHM3Q86XJ0 350 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 PTOV1Q86YD1 416 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 PLCZ1Q86YW0 608 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 SIAH3Q8IW03 269 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 SLC15A3Q8IY34 581 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 ZZZ3Q8IYH5 903 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 FAM109AQ8N4B1 249 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 TMEM251Q8N6I4 163 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 NFKBIDQ8NI38 313 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 BBS10Q8TAM1 723 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 NSL1Q96IY1 281 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 TREX2Q9BQ50 279 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-201ENST00000374673 SLX1AQ9BQ83 275 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 ECSITQ9BQ95 431 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 UBQLN3Q9H347 655 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 ZDHHC11Q9H8X9 412 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 MTHFD2LQ9H903 347 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-201ENST00000374673 OLAHQ9NV23 265 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 QPCTLQ9NXS2 382 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 B4GALT7Q9UBV7 327 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 C15orf41Q9Y2V0 281 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 HRH3Q9Y5N1 445 aa13.7□□□□□ -0.22
HSPG2-201ENST00000374673 SHANK1Q9Y566 2161 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 BOD1L1Q8NFC6 3051 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 SERINC4A6NH21 518 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 FAM166BA8MTA8 275 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 B4DXG7 233 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 C5orf58C9J3I9 102 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 H3BNH8 94 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 TFECO14948 347 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-201ENST00000374673 CBR3O75828 277 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 PGM3O95394 542 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 RFPL3SP0C7P2 107 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 ESRRAP11474 423 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-201ENST00000374673 ENDOUP21128 410 aaKnown RBP13.69□□□□□ -0.22
HSPG2-201ENST00000374673 CALB2P22676 271 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 MST1P26927 711 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 TDGF1P3P51864 188 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 MNAT1P51948 309 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 SCARB2Q14108 478 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 CD226Q15762 336 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 MAPK14Q16539 360 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 RPS26P11Q5JNZ5 115 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-201ENST00000374673 REEP3Q6NUK4 255 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 SLC30A8Q8IWU4 369 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 ZNF614Q8N883 585 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 FADS6Q8N9I5 356 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 GATSQ8NAP1 163 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 C11orf65Q8NCR3 313 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 HIPK4Q8NE63 616 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 DUSP19Q8WTR2 217 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 ZG16BQ96DA0 208 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 DTNBP1Q96EV8 351 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 ZNF583Q96ND8 569 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 GNRHR2Q96P88 292 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 QRSL1Q9H0R6 528 aaKnown RBP13.69□□□□□ -0.22
HSPG2-201ENST00000374673 CMTM6Q9NX76 183 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 ABCD2Q9UBJ2 740 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 ANGPT4Q9Y264 503 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 PCNX3Q9H6A9 2034 aa13.69□□□□□ -0.22
HSPG2-201ENST00000374673 ZFYVE26Q68DK2 2539 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 C17orf51A8MQB3 221 aa13.68□□□□□ -0.22
HSPG2-201ENST00000374673 FAM220BPB1ANY3 271 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms