RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 NTNG1Q9Y2I2 539 aa11.26□□□□□ -0.61
HMGCL-202ENST00000374487 DSCR3O14972 297 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 STX11O75558 287 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 RAB36O95755 333 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 ATP1B1P05026 303 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 ACP2P11117 423 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 PSMA1P25786 263 aaKnown RBP11.25□□□□□ -0.61
HMGCL-202ENST00000374487 SOX3P41225 446 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 PPP5CP53041 499 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 MAP4K2Q12851 820 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 STPG1Q5TH74 334 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 RASSF6Q6ZTQ3 369 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 RNF44Q7L0R7 432 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF438Q7Z4V0 828 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 ATCAYQ86WG3 371 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 NKAIN4Q8IVV8 208 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 CYP4Z2PQ8N1L4 340 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 NANOGP1Q8N7R0 232 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 COX18Q8N8Q8 333 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 PROKR2Q8NFJ6 384 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 OR9Q1Q8NGQ5 310 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 GPR151Q8TDV0 419 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 OPALINQ96PE5 141 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 RACGAP1Q9H0H5 632 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 CCDC59Q9P031 241 aaKnown RBP11.25□□□□□ -0.61
HMGCL-202ENST00000374487 A3GALT2U3KPV4 340 aa11.25□□□□□ -0.61
HMGCL-202ENST00000374487 AGAP5A6NIR3 686 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 CYR61O00622 381 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 GALR3O60755 368 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-202ENST00000374487 CSO75390 466 aaKnown RBP11.24□□□□□ -0.61
HMGCL-202ENST00000374487 OR5F1O95221 314 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 NTN1O95631 604 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 MYL12AP19105 171 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 OMPP47874 163 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 BLKP51451 505 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 DUSP8Q13202 625 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 FZD2Q14332 565 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 SSX1Q16384 188 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 DCST2Q5T1A1 773 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 C19orf48Q6RUI8 117 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF836Q6ZNA1 936 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 GDF7Q7Z4P5 450 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 RANBP3LQ86VV4 465 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-202ENST00000374487 NRMQ8IXM6 262 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 CDRT4Q8N9R6 151 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 OR52I1Q8NGK6 324 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 TMEM163Q8TC26 289 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 OSTF1Q92882 214 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 CDADC1Q9BWV3 514 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 TAPBPLQ9BX59 468 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 KRCC1Q9NPI7 259 aaPredicted RBP11.24□□□□□ -0.61
HMGCL-202ENST00000374487 NLGN3Q9NZ94 848 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 SLC7A7Q9UM01 511 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 CFL2Q9Y281 166 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 GPR52Q9Y2T5 361 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 LSM2Q9Y333 95 aaKnown RBP11.24□□□□□ -0.61
HMGCL-202ENST00000374487 PI4KAP42356 2102 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 PCDH15Q96QU1 1955 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 A0A087WV62 115 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 A0A1W2PR77 199 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 OR5K3A6NET4 321 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 SGK494L7N484 410 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 PLOD3O60568 738 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 LRP3O75074 770 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 UBXN7O94888 489 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 DBIP07108 87 aaKnown RBP11.24□□□□□ -0.61
HMGCL-202ENST00000374487 THBS1P07996 1170 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 STAT5AP42229 794 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 GPR4P46093 362 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 PPP1CAP62136 330 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 EFNB1P98172 346 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 RNLSQ5VYX0 342 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 NIPAL1Q6NVV3 410 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 ZNF619Q8N2I2 560 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 TMEM52Q8NDY8 209 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 TOR1AIP2Q8NFQ8 470 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 RNF217Q8TC41 542 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 ZDHHC1Q8WTX9 485 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 TMEM255BQ8WV15 326 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 PIK3R3Q92569 461 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 KLHDC7BQ96G42 594 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 CNPPD1Q9BV87 410 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 HHATLQ9HCP6 504 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 DIMT1Q9UNQ2 313 aaKnown RBP11.24□□□□□ -0.61
HMGCL-202ENST00000374487 KNL1Q8NG31 2342 aa11.24□□□□□ -0.61
HMGCL-202ENST00000374487 IRGMA1A4Y4 181 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 FUOMA2VDF0 154 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 B4DGG1 531 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 PRODHO43272 600 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 OR10H2O60403 315 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 GPX5O75715 221 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 GNSP15586 552 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 CDH3P22223 829 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 FPR3P25089 353 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 CD40LGP29965 261 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 AFF3P51826 1226 aaKnown RBP11.23□□□□□ -0.61
HMGCL-202ENST00000374487 LIMK1P53667 647 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 IFITM3Q01628 133 aa11.23□□□□□ -0.61
HMGCL-202ENST00000374487 EXOSC7Q15024 291 aaKnown RBP11.23□□□□□ -0.61
HMGCL-202ENST00000374487 HLA-BQ31612 363 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 243.6 ms