RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 TSGA10Q9BZW7 698 aa10.68□□□□□ -0.7
HDAC8-204ENST00000373560 MYOZ1Q9NP98 299 aaPredicted RBP10.68□□□□□ -0.7
HDAC8-204ENST00000373560 IGHV3-15A0A0B4J1V0 119 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 C9JVG2 144 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 ADAMDEC1O15204 470 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 FADS1O60427 444 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 GGT1P19440 569 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 PCMT1P22061 227 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 PTAFRP25105 342 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 PSMA4P25789 261 aaKnown RBP10.67□□□□□ -0.7
HDAC8-204ENST00000373560 IL12BP29460 328 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 FEN1P39748 380 aaKnown RBP10.67□□□□□ -0.7
HDAC8-204ENST00000373560 VPS41P49754 854 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 HNMTP50135 292 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 FOXG1P55316 489 aaPredicted RBP10.67□□□□□ -0.7
HDAC8-204ENST00000373560 GPX6P59796 221 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 SLC25A3Q00325 362 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 IRF8Q02556 426 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 RIN1Q13671 783 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 MLC1Q15049 377 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 TRIP13Q15645 432 aaPredicted RBP10.67□□□□□ -0.7
HDAC8-204ENST00000373560 PDK4Q16654 411 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 MARCH3Q86UD3 253 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 EXOC3L1Q86VI1 746 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 ZNF540Q8NDQ6 660 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 OR4K14Q8NGD5 310 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 CLDND2Q8NHS1 167 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 HUS1BQ8NHY5 278 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 RGMAQ96B86 450 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 DTNBP1Q96EV8 351 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 PDLIM5Q96HC4 596 aaKnown RBP10.67□□□□□ -0.7
HDAC8-204ENST00000373560 SLITRK2Q9H156 845 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 CXorf36Q9H7Y0 433 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 MYNNQ9NPC7 610 aa10.67□□□□□ -0.7
HDAC8-204ENST00000373560 DNAH3Q8TD57 4116 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
HDAC8-204ENST00000373560 DNAJC9-AS1A6NH13 148 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 SASH3O75995 380 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 MSMBP08118 114 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 IGFBP1P08833 259 aaPredicted RBP10.66□□□□□ -0.7
HDAC8-204ENST00000373560 DAOP14920 347 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 PORP16435 677 aaPredicted RBP10.66□□□□□ -0.7
HDAC8-204ENST00000373560 OR3A2P47893 321 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 KCNJ1P48048 391 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 SARNPP82979 210 aaKnown RBP10.66□□□□□ -0.7
HDAC8-204ENST00000373560 SCGB2A2Q13296 93 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 EFR3AQ14156 821 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 E2F2Q14209 437 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 MORF4L2Q15014 288 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 ZNF628Q5EBL2 1059 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 C6orf163Q5TEZ5 329 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 FAHD2BQ6P2I3 314 aaPredicted RBP10.66□□□□□ -0.7
HDAC8-204ENST00000373560 FRA10AC1Q70Z53 315 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 LMNTD2Q8IXW0 634 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 SPATA6LQ8N4H0 392 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 ZNF433Q8N7K0 673 aaPredicted RBP10.66□□□□□ -0.7
HDAC8-204ENST00000373560 UHMK1Q8TAS1 419 aaKnown RBP10.66□□□□□ -0.7
HDAC8-204ENST00000373560 CALML6Q8TD86 181 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 DUSP19Q8WTR2 217 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 SLC9A6Q92581 669 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 OSTF1Q92882 214 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 FAHD2AQ96GK7 314 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 ZNF300Q96RE9 604 aaPredicted RBP10.66□□□□□ -0.7
HDAC8-204ENST00000373560 MTERF1Q99551 399 aaKnown RBP10.66□□□□□ -0.7
HDAC8-204ENST00000373560 LACRTQ9GZZ8 138 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 MMP27Q9H306 513 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 G6PC2Q9NQR9 355 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 GRIP1Q9Y3R0 1128 aa10.66□□□□□ -0.7
HDAC8-204ENST00000373560 COL7A1Q02388 2944 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 GOLGA6L22H0YM25 854 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 ERAL1O75616 437 aaKnown RBP10.65□□□□□ -0.7
HDAC8-204ENST00000373560 SNUPNO95149 360 aaKnown RBP10.65□□□□□ -0.7
HDAC8-204ENST00000373560 IGHV3-9P01782 118 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 GCH1P30793 250 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 NAP1L1P55209 391 aaKnown RBP10.65□□□□□ -0.7
HDAC8-204ENST00000373560 SNRPD2P62316 118 aaKnown RBP10.65□□□□□ -0.7
HDAC8-204ENST00000373560 TGFBIQ15582 683 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 MED27Q6P2C8 311 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 CYP20A1Q6UW02 462 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 APOOLQ6UXV4 268 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 C1QL2Q7Z5L3 287 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 WDR75Q8IWA0 830 aaKnown RBP10.65□□□□□ -0.7
HDAC8-204ENST00000373560 RNF10Q8N5U6 811 aaKnown RBP10.65□□□□□ -0.7
HDAC8-204ENST00000373560 SIGLECL1Q8N7X8 197 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 POC1BQ8TC44 478 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 FAM110BQ8TC76 370 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 LRRC58Q96CX6 371 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 RNF145Q96MT1 663 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 VSTM2LQ96N03 204 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 LRRC1Q9BTT6 524 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 TMPRSS13Q9BYE2 586 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 TSPY26PQ9H489 355 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 DDX31Q9H8H2 851 aaKnown RBP10.65□□□□□ -0.7
HDAC8-204ENST00000373560 WDR41Q9HAD4 459 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 DDX28Q9NUL7 540 aaKnown RBP10.65□□□□□ -0.7
HDAC8-204ENST00000373560 MOKQ9UQ07 419 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 CFL2Q9Y281 166 aa10.65□□□□□ -0.7
HDAC8-204ENST00000373560 REXO2Q9Y3B8 237 aaKnown RBP10.65□□□□□ -0.7
HDAC8-204ENST00000373560 BANF1O75531 89 aa10.64□□□□□ -0.71
HDAC8-204ENST00000373560 PNPP00491 289 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms