RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 NPIPA8P0DM63 369 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 SLC1A3P43003 542 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 KIR2DS5Q14953 304 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 TMPRSS11AQ6ZMR5 421 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 TAF8Q7Z7C8 310 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 OR4F15Q8NGB8 312 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 ASB15Q8WXK1 588 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 KCTD7Q96MP8 289 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 ARHGAP9Q9BRR9 750 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 STARD5Q9NSY2 213 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 C14orf119Q9NWQ9 140 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 CSNK1G3Q9Y6M4 447 aa26.9■■□□□ 1.9
SSBP3-204ENST00000371320 OR5K4A6NMS3 321 aa26.89■■□□□ 1.9
SSBP3-204ENST00000371320 KCNK2O95069 426 aa26.89■■□□□ 1.9
SSBP3-204ENST00000371320 IGHV4-34P06331 123 aa26.89■■□□□ 1.9
SSBP3-204ENST00000371320 HTR2AP28223 471 aa26.89■■□□□ 1.9
SSBP3-204ENST00000371320 RNF144AP50876 292 aaPredicted RBP26.89■■□□□ 1.9
SSBP3-204ENST00000371320 FIGNL1Q6PIW4 674 aa26.89■■□□□ 1.9
SSBP3-204ENST00000371320 HSDL2Q6YN16 418 aa26.89■■□□□ 1.9
SSBP3-204ENST00000371320 ZNF761Q86XN6 746 aaPredicted RBP26.89■■□□□ 1.9
SSBP3-204ENST00000371320 H2AFY2Q9P0M6 372 aaPredicted RBP26.89■■□□□ 1.9
SSBP3-204ENST00000371320 KCNE5Q9UJ90 142 aa26.89■■□□□ 1.9
SSBP3-204ENST00000371320 SF3B6Q9Y3B4 125 aaKnown RBP26.89■■□□□ 1.9
SSBP3-204ENST00000371320 MN1Q10571 1320 aaPredicted RBP26.89■■□□□ 1.9
SSBP3-204ENST00000371320 UNC119BA6NIH7 251 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 SLC2A10O95528 541 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 LTBRP36941 435 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 CD79BP40259 229 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 GCGRP47871 477 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 COPZ1P61923 177 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 PPP1CAP62136 330 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 PSPHP78330 225 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 MGAT2Q10469 447 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 DSG2Q14126 1118 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 OR1Q1Q15612 314 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 CRTC2Q53ET0 693 aaPredicted RBP26.89■■□□□ 1.89
SSBP3-204ENST00000371320 LAX1Q8IWV1 398 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 OR8H2Q8N162 312 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 BBS1Q8NFJ9 593 aa26.89■■□□□ 1.89
SSBP3-204ENST00000371320 CDHR4A6H8M9 788 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 SGK494L7N484 410 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 CT62P0C5K7 136 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 HTR1FP30939 366 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 GABRA3P34903 492 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 NXNL2Q5VZ03 156 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 TM9SF2Q99805 663 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 UBQLN3Q9H347 655 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 CMAHPQ9Y471 501 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 SCN2AQ99250 2005 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 APOA1P02647 267 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 CLEC2LP0C7M8 214 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 MSL3P1P0C860 447 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 GABRA5P31644 462 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 EIF2B5Q13144 721 aaKnown RBP26.88■■□□□ 1.89
SSBP3-204ENST00000371320 HNRNPA0Q13151 305 aaKnown RBP26.88■■□□□ 1.89
SSBP3-204ENST00000371320 DESI1Q6ICB0 168 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 GDPD3Q7L5L3 318 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 ZNF485Q8NCK3 441 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 NECTIN4Q96NY8 510 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 WDFY2Q96P53 400 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 DPH1Q9BZG8 443 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 CBLCQ9ULV8 474 aa26.88■■□□□ 1.89
SSBP3-204ENST00000371320 EXOGQ9Y2C4 368 aaKnown RBP26.88■■□□□ 1.89
SSBP3-204ENST00000371320 LRRTM2O43300 516 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 AK1P00568 194 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 ATP6V1E1P36543 226 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 POU6F2P78424 691 aaPredicted RBP26.87■■□□□ 1.89
SSBP3-204ENST00000371320 WDR88Q6ZMY6 472 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 QSOX2Q6ZRP7 698 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 ZNF438Q7Z4V0 828 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 OOSP2Q86WS3 158 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 RBM12BQ8IXT5 1001 aaKnown RBP26.87■■□□□ 1.89
SSBP3-204ENST00000371320 RNF113BQ8IZP6 322 aaKnown RBP26.87■■□□□ 1.89
SSBP3-204ENST00000371320 BRIX1Q8TDN6 353 aaKnown RBP26.87■■□□□ 1.89
SSBP3-204ENST00000371320 TMEM239Q8WW34 195 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 MSLNLQ96KJ4 702 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 SACM1LQ9NTJ5 587 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 USP36Q9P275 1121 aaKnown RBP26.87■■□□□ 1.89
SSBP3-204ENST00000371320 ZNF223Q9UK11 482 aaPredicted RBP26.87■■□□□ 1.89
SSBP3-204ENST00000371320 V9GYH0 126 aa26.87■■□□□ 1.89
SSBP3-204ENST00000371320 SPTBN5Q9NRC6 3674 aaKnown RBP26.87■■□□□ 1.89
SSBP3-204ENST00000371320 IMPDH2P12268 514 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 SDC2P34741 201 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 CPOQ8IVL8 374 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 ZFP41Q8N8Y5 198 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 ANKRD9Q96BM1 317 aaPredicted RBP26.86■■□□□ 1.89
SSBP3-204ENST00000371320 OTULINQ96BN8 352 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 OR52D1Q9H346 318 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 HINT3Q9NQE9 182 aaKnown RBP26.86■■□□□ 1.89
SSBP3-204ENST00000371320 LRP4O75096 1905 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 GXYLT2A0PJZ3 443 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 SNPHO15079 494 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 MAP3K8P41279 467 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 SLC9A3P48764 834 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 CCBE1Q6UXH8 406 aaPredicted RBP26.86■■□□□ 1.89
SSBP3-204ENST00000371320 LSRQ86X29 649 aaPredicted RBP26.86■■□□□ 1.89
SSBP3-204ENST00000371320 EGFL6Q8IUX8 553 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 PFN4Q8NHR9 129 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 FANK1Q8TC84 345 aa26.86■■□□□ 1.89
SSBP3-204ENST00000371320 CD180Q99467 661 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms