RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 MAN2C1Q9NTJ4 1040 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 ABRACLQ9P1F3 81 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 AKAP11Q9UKA4 1901 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 FZD7O75084 574 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 ALX3O95076 343 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 DCNP07585 359 aaKnown RBP15□□□□□ -0.01
COL17A1-202ENST00000369733 PIM1P11309 404 aaPredicted RBP15□□□□□ -0.01
COL17A1-202ENST00000369733 PSMB10P40306 273 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 CAMLGP49069 296 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 RACK1P63244 317 aaKnown RBP15□□□□□ -0.01
COL17A1-202ENST00000369733 CACNA1SQ13698 1873 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 FGL2Q14314 439 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 INAVAQ3KP66 663 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 C3orf38Q5JPI3 329 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 OR6N1Q8NGY5 312 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 ACOT11Q8WXI4 607 aaPredicted RBP15□□□□□ -0.01
COL17A1-202ENST00000369733 CERS4Q9HA82 394 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 MUSKO15146 869 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 ARRB2P32121 409 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 TRIM46Q7Z4K8 759 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 TPRA1Q86W33 373 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 OR56B4Q8NH76 319 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 SLC7A6Q92536 515 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 HRASLS2Q9NWW9 162 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 DNAJC25-GNG10A0A024R161 153 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 MBLAC1A4D2B0 266 aaPredicted RBP15□□□□□ -0.01
COL17A1-202ENST00000369733 IFNA2P01563 188 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 PDGFAP04085 211 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 CLRN1P58418 232 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 FCN2Q15485 313 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 ALKBH2Q6NS38 261 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 FAM83HQ6ZRV2 1179 aaPredicted RBP15□□□□□ -0.01
COL17A1-202ENST00000369733 RAB7BQ96AH8 199 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 COPS3Q9UNS2 423 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 PCDHGA6Q9Y5G7 932 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 FBXO45P0C2W1 286 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 ARNTP27540 789 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 CD6P30203 668 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 FAM122CQ6P4D5 195 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 SDR9C7Q8NEX9 313 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 KIAA1143Q96AT1 154 aaPredicted RBP15□□□□□ -0.01
COL17A1-202ENST00000369733 OR2M4Q96R27 311 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 CTRCQ99895 268 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 BIN3Q9NQY0 253 aa15□□□□□ -0.01
COL17A1-202ENST00000369733 C2orf74A8MZ97 194 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 PEX14O75381 377 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 ADH1BP00325 375 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 RAP2BP61225 183 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 SYPL1Q16563 259 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 MARCH8Q5T0T0 291 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 SLC18B1Q6NT16 456 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 LCTLQ6UWM7 567 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 APOOLQ6UXV4 268 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 METTL27Q8N6F8 245 aaPredicted RBP14.99□□□□□ -0.01
COL17A1-202ENST00000369733 TCTEX1D2Q8WW35 142 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 FCRL1Q96LA6 429 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 INPP5EQ9NRR6 644 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 MEIS3P1A6NDR6 274 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 ANTXRLA6NF34 631 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 CLEC2LP0C7M8 214 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 OPCMLQ14982 345 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 ZER1Q7Z7L7 766 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 OR52D1Q9H346 318 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 GDI1P31150 447 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 CTXN1P60606 82 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 EIF2S3LQ2VIR3 472 aaKnown RBP14.99□□□□□ -0.01
COL17A1-202ENST00000369733 XKR7Q5GH72 579 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 KIAA0319Q5VV43 1072 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 ALKAL2Q6UX46 152 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 SNX11Q9Y5W9 270 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 A0A1B0GUL6 1792 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 A0A1B0GV50 99 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 CERS1P27544 350 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 RAB28P51157 221 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 CYCSP99999 105 aaKnown RBP14.99□□□□□ -0.01
COL17A1-202ENST00000369733 LKAAEAR1Q8TD35 194 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 SGIP1Q9BQI5 828 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 USP36Q9P275 1121 aaKnown RBP14.99□□□□□ -0.01
COL17A1-202ENST00000369733 MYEF2Q9P2K5 600 aaKnown RBP14.99□□□□□ -0.01
COL17A1-202ENST00000369733 V9GY05 133 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 TJP1Q07157 1748 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 POLR1CO15160 346 aaPredicted RBP14.99□□□□□ -0.01
COL17A1-202ENST00000369733 FGF18O76093 207 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 IGFBP4P22692 258 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 SEMA3BQ13214 749 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 C6orf132Q5T0Z8 1188 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 ALKAL1Q6UXT8 129 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 GDPD3Q7L5L3 318 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF582Q96NG8 517 aaPredicted RBP14.99□□□□□ -0.01
COL17A1-202ENST00000369733 RNF167Q9H6Y7 350 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 DIMT1Q9UNQ2 313 aaKnown RBP14.99□□□□□ -0.01
COL17A1-202ENST00000369733 IER3IP1Q9Y5U9 82 aa14.99□□□□□ -0.01
COL17A1-202ENST00000369733 RPS19P39019 145 aaKnown RBP14.98□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF417Q8TAU3 575 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 UBTD2Q8WUN7 234 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 MMABQ96EY8 250 aaPredicted RBP14.98□□□□□ -0.01
COL17A1-202ENST00000369733 DHRS1Q96LJ7 313 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 TMX2-CTNND1H3BSU7 103 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 GYPBP06028 91 aa14.98□□□□□ -0.01
COL17A1-202ENST00000369733 TRAPPC2P0DI81 140 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms