RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 AIF1LQ9BQI0 150 aa12.69□□□□□ -0.38
PRKN-205ENST00000366897 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
PRKN-205ENST00000366897 ALG8Q9BVK2 526 aa12.69□□□□□ -0.38
PRKN-205ENST00000366897 C6orf106Q9H6K1 298 aaPredicted RBP12.69□□□□□ -0.38
PRKN-205ENST00000366897 ISYNA1Q9NPH2 558 aa12.69□□□□□ -0.38
PRKN-205ENST00000366897 SLC35C2Q9NQQ7 365 aa12.69□□□□□ -0.38
PRKN-205ENST00000366897 TMEM5Q9Y2B1 443 aa12.69□□□□□ -0.38
PRKN-205ENST00000366897 PLXNA2O75051 1894 aa12.69□□□□□ -0.38
PRKN-205ENST00000366897 WASH3PC4AMC7 463 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 TEX46H3BTG2 121 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 SCAMP1O15126 338 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 SPINT1O43278 529 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 FGBP02675 491 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 LRG1P02750 347 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 ANXA3P12429 323 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 RPS7P62081 194 aaKnown RBP12.68□□□□□ -0.38
PRKN-205ENST00000366897 PGGHGQ32M88 737 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 PLEKHM3Q6ZWE6 761 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 CHMP1BQ7LBR1 199 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 C16orf62Q7Z3J2 963 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 CDH24Q86UP0 819 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 PIGXQ8TBF5 258 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 IRF7Q92985 503 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 SCMH1Q96GD3 660 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 CHIAQ9BZP6 476 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 ANKRD34CP0C6C1 535 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 CLUP10909 449 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 SPTBP11277 2137 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 SNRPBP14678 240 aaKnown RBP12.68□□□□□ -0.38
PRKN-205ENST00000366897 MAPK9P45984 424 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 EPHA5P54756 1037 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 TRAM2Q15035 370 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 LTB4RQ15722 352 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 ST3GAL2Q16842 350 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 ZNF697Q5TEC3 545 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 C18orf63Q68DL7 685 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 HBMQ6B0K9 141 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 SFXN4Q6P4A7 337 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 RASSF6Q6ZTQ3 369 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 DGLUCYQ7Z3D6 616 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 CEACAM19Q7Z692 300 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 HMGB4Q8WW32 186 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 DIO2Q92813 273 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 RFKQ969G6 155 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 RAD51AP1Q96B01 352 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 CNRIP1Q96F85 164 aaPredicted RBP12.68□□□□□ -0.38
PRKN-205ENST00000366897 TIMP4Q99727 224 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 CACNG6Q9BXT2 260 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 OR51V1Q9H2C8 321 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 CCDC86Q9H6F5 360 aaKnown RBP12.68□□□□□ -0.38
PRKN-205ENST00000366897 SCML1Q9UN30 329 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 PPIEQ9UNP9 301 aaKnown RBP12.68□□□□□ -0.38
PRKN-205ENST00000366897 FLVCR2Q9UPI3 526 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
PRKN-205ENST00000366897 IRGMA1A4Y4 181 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 ZIC2O95409 532 aaPredicted RBP12.67□□□□□ -0.38
PRKN-205ENST00000366897 GYPBP06028 91 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 MC3RP41968 323 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 KHKP50053 298 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 RGS8P57771 180 aaPredicted RBP12.67□□□□□ -0.38
PRKN-205ENST00000366897 RIN1Q13671 783 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 SLC36A2Q495M3 483 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 ARHGAP15Q53QZ3 475 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 TMEM240Q5SV17 173 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 C9orf64Q5T6V5 341 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 TMEM65Q6PI78 240 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 CXXC5Q7LFL8 322 aaKnown RBP12.67□□□□□ -0.38
PRKN-205ENST00000366897 OAFQ86UD1 273 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 SUN3Q8TAQ9 357 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 ORAI1Q96D31 301 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 VWCEQ96DN2 955 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 CHFRQ96EP1 664 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 ZCCHC2Q9C0B9 1178 aaKnown RBP12.67□□□□□ -0.38
PRKN-205ENST00000366897 FBXL4Q9UKA2 621 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 POLHQ9Y253 713 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 ATG4BQ9Y4P1 393 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 CHST10O43529 356 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 SSNA1O43805 119 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 HPXP02790 462 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 PAICSP22234 425 aaKnown RBP12.67□□□□□ -0.38
PRKN-205ENST00000366897 ACSL1P33121 698 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 FRKP42685 505 aaPredicted RBP12.67□□□□□ -0.38
PRKN-205ENST00000366897 TAS2R38P59533 333 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 BTG1P62324 171 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 SNTA1Q13424 505 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 AGERQ15109 404 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 TCEA2Q15560 299 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 LCTLQ6UWM7 567 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 LRRC28Q86X40 367 aaPredicted RBP12.67□□□□□ -0.38
PRKN-205ENST00000366897 LSMEM1Q8N8F7 131 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 CYB561A3Q8NBI2 242 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 GIMAP1Q8WWP7 306 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 RGMAQ96B86 450 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 DPH1Q9BZG8 443 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 OR52A5Q9H2C5 316 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 SLC38A1Q9H2H9 487 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 CXXC1Q9P0U4 656 aaPredicted RBP12.67□□□□□ -0.38
PRKN-205ENST00000366897 COL4A3Q01955 1670 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 OBSL1O75147 1896 aa12.67□□□□□ -0.38
PRKN-205ENST00000366897 CENPVL1A0A0U1RR11 272 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms