RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 USP9YO00507 2555 aaPredicted RBP15.33■□□□□ 0.05
CKLF-204ENST00000362093 PCNX1Q96RV3 2341 aa15.33■□□□□ 0.05
CKLF-204ENST00000362093 PCNX3Q9H6A9 2034 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 UQCRHLA0A096LP55 91 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 POLR3GO15318 223 aaPredicted RBP15.33■□□□□ 0.04
CKLF-204ENST00000362093 EDF1O60869 148 aaKnown RBP15.33■□□□□ 0.04
CKLF-204ENST00000362093 CLDN14O95500 239 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 EPPINO95925 133 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 AK1P00568 194 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 C1QCP02747 245 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 HPGDP15428 266 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 ATP6V1C1P21283 382 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 MSX1P28360 303 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 GCKP35557 465 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 CDKN2CP42773 168 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 POLR2JP52435 117 aaKnown RBP15.33■□□□□ 0.04
CKLF-204ENST00000362093 ATP12AP54707 1039 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 CASP9P55211 416 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 ZNF630Q2M218 657 aaPredicted RBP15.33■□□□□ 0.04
CKLF-204ENST00000362093 ARHGAP11BQ3KRB8 267 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 GLYR1Q49A26 553 aaPredicted RBP15.33■□□□□ 0.04
CKLF-204ENST00000362093 KLHL26Q53HC5 615 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 SP5Q6BEB4 398 aaPredicted RBP15.33■□□□□ 0.04
CKLF-204ENST00000362093 HEPHL1Q6MZM0 1159 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 AAGABQ6PD74 315 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 ENPP6Q6UWR7 440 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 ZNF621Q6ZSS3 439 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 MISPQ8IVT2 679 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 GATSQ8NAP1 163 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 OR9I1Q8NGQ6 314 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 ASB5Q8WWX0 329 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 STON2Q8WXE9 905 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 C1GALT1C1Q96EU7 318 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 CAMK2AQ9UQM7 478 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 RNF6Q9Y252 685 aa15.33■□□□□ 0.04
CKLF-204ENST00000362093 RPH3AQ9Y2J0 694 aaPredicted RBP15.33■□□□□ 0.04
CKLF-204ENST00000362093 NPIPA5A0A0B4J1W7 369 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 FAM234BA2RU67 622 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 PRSS44E7EML9 344 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 NPIPA7E9PJI5 369 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 SCDO00767 359 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 AGR2O95994 175 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 GUSBP08236 651 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 NPIPA8P0DM63 369 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 OR12D1P0DN82 309 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 HK1P19367 917 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 HTR1EP28566 365 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 GRNP28799 593 aaKnown RBP15.32■□□□□ 0.04
CKLF-204ENST00000362093 CHRNB4P30926 498 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 DCTP40126 519 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 ADH7P40394 386 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 STARP49675 285 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 LHX2P50458 406 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 SF3B4Q15427 424 aaKnown RBP eCLIP15.32■□□□□ 0.04
CKLF-204ENST00000362093 CD226Q15762 336 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 TMEM44Q2T9K0 475 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 MSANTD1Q6ZTZ1 278 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 TRIML2Q8N7C3 387 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 LILRB4Q8NHJ6 448 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 ZPLD1Q8TCW7 415 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 XAGE5Q8WWM1 108 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 SFXN2Q96NB2 322 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 PTPN13Q12923 2485 aa15.32■□□□□ 0.04
CKLF-204ENST00000362093 A0A0G2JNJ9 132 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 KDM4EB2RXH2 506 aaPredicted RBP15.31■□□□□ 0.04
CKLF-204ENST00000362093 RFXANKO14593 260 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 FCMRO60667 390 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 STX11O75558 287 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 TOXO94900 526 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 GSNP06396 782 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 ZCCHC18P0CG32 403 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 ZNF708P17019 499 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 TIMP3P35625 211 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 CHI3L1P36222 383 aaPredicted RBP15.31■□□□□ 0.04
CKLF-204ENST00000362093 BCL2A1Q16548 175 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 ACSF3Q4G176 576 aaPredicted RBP15.31■□□□□ 0.04
CKLF-204ENST00000362093 FLYWCH1Q4VC44 716 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.31■□□□□ 0.04
CKLF-204ENST00000362093 RIPPLY2Q5TAB7 128 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 NSUN5P2Q63ZY6 315 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 TNFAIP8L2Q6P589 184 aaPredicted RBP15.31■□□□□ 0.04
CKLF-204ENST00000362093 ARSKQ6UWY0 536 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 MTERF4Q7Z6M4 381 aaKnown RBP15.31■□□□□ 0.04
CKLF-204ENST00000362093 CCDC71Q8IV32 467 aaPredicted RBP15.31■□□□□ 0.04
CKLF-204ENST00000362093 FUNDC1Q8IVP5 155 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 ZNF527Q8NB42 609 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 OR10Q1Q8NGQ4 319 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 CA5BP1Q8WTZ4 195 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 RAB8BQ92930 207 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 NMUR2Q9GZQ4 415 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 CALHM2Q9HA72 323 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 SLC6A13Q9NSD5 602 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 EXD2Q9NVH0 621 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 Q9UFV3 132 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 DTNAQ9Y4J8 743 aa15.31■□□□□ 0.04
CKLF-204ENST00000362093 PRAMEF27A3QJZ7 478 aa15.3■□□□□ 0.04
CKLF-204ENST00000362093 CD8B2A6NJW9 211 aa15.3■□□□□ 0.04
CKLF-204ENST00000362093 LINC01387J3KSC0 135 aa15.3■□□□□ 0.04
CKLF-204ENST00000362093 HMGN4O00479 90 aa15.3■□□□□ 0.04
CKLF-204ENST00000362093 ATP8B1O43520 1251 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms