RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 H0YGG7 62 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 PABPC4LP0CB38 370 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 C9orf152Q5JTZ5 239 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 PGM2L1Q6PCE3 622 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 ISCA2Q86U28 154 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 OR2T4Q8NH00 348 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 CDCP1Q9H5V8 836 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 BOKQ9UMX3 212 aaPredicted RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 ST14Q9Y5Y6 855 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 A0A0U1RQK1 487 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 CSNK2A1P68400 391 aaPredicted RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 KIR2DS3Q14952 304 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 MEX3BQ6ZN04 569 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 TEX26Q8N6G2 289 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 CSNK2A3Q8NEV1 391 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 SAT2Q96F10 170 aaPredicted RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 SUCNR1Q9BXA5 334 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 CARD8Q9Y2G2 431 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 EEDO75530 441 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 SORBS2O94875 1100 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 GNAO1P09471 354 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 DCDP81605 110 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 TMEM176BQ3YBM2 270 aaPredicted RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 VASNQ6EMK4 673 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 PM20D1Q6GTS8 502 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 NIPAL3Q6P499 406 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 OR13H1Q8NG92 308 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 FKRPQ9H9S5 495 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 H0Y8X5 98 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 HOXD8P13378 290 aaPredicted RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 HSD3B1P14060 373 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 DAP3P51398 398 aaKnown RBP19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 TRAPPC13A5PLN9 417 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 GABBR2O75899 941 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 MPIG6BO95866 241 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 SERPINA2P20848 420 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 ESX1Q8N693 406 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 IL17RDQ8NFM7 739 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 CD320Q9NPF0 282 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 DUSP13Q9UII6 198 aa19.09■□□□□ 0.65
CDC42BPB-201ENST00000361246 F13BP05160 661 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 GPR19Q15760 415 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 TMIEQ8NEW7 156 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 CBLCQ9ULV8 474 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 MRPL33O75394 65 aaKnown RBP19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 NPPAP01160 153 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 BPHLQ86WA6 291 aaPredicted RBP19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 MLXQ9UH92 298 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 FAM166BA8MTA8 275 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 FOXD2O60548 495 aaPredicted RBP19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 C8BP07358 591 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 CLDN8P56748 225 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 CLDN17P56750 224 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 SFRP4Q6FHJ7 346 aaPredicted RBP19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 RPL13AP3Q6NVV1 102 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 ABHD12BQ7Z5M8 362 aaPredicted RBP19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 SPPL3Q8TCT6 385 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 DUSP19Q8WTR2 217 aa19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 C12orf43Q96C57 262 aaKnown RBP19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 TSPAN10Q9H1Z9 355 aaPredicted RBP19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 UBE2ZQ9H832 354 aaPredicted RBP19.08■□□□□ 0.65
CDC42BPB-201ENST00000361246 LIPCP11150 499 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 TANKQ92844 425 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 BMFQ96LC9 184 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 TINAGL1Q9GZM7 467 aaPredicted RBP19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 EIF5A2Q9GZV4 153 aaKnown RBP19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 SAGE1Q9NXZ1 904 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 AP1M2Q9Y6Q5 423 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 EFR3AQ14156 821 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 SERPINA12Q8IW75 414 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 C3orf49Q96BT1 292 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 HCAR1Q9BXC0 346 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 DEFB127Q9H1M4 99 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 CDK5RAP2Q96SN8 1893 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 B3GALT4O96024 378 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 SLC5A2P31639 672 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 RGNQ15493 299 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 MINDY2Q8NBR6 621 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 OR5H2Q8NGV7 314 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 CCDC106Q9BWC9 280 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 ERVK13-1Q9NX77 482 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 DNAJC15Q9Y5T4 150 aa19.08■□□□□ 0.64
CDC42BPB-201ENST00000361246 TMX2-CTNND1H3BSU7 103 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 F3P13726 295 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 OR8B8Q15620 311 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 ADIPOR2Q86V24 386 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 THOC3Q96J01 351 aaKnown RBP19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 F11P03951 625 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 SEC61A1P61619 476 aaKnown RBP19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 SF3B4Q15427 424 aaKnown RBP eCLIP19.07■□□□□ 0.641e-6■■■□□ 16.5
CDC42BPB-201ENST00000361246 RPH3ALQ9UNE2 315 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 MBLAC1A4D2B0 266 aaPredicted RBP19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 GFRA2O00451 464 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 SCGB2A1O75556 95 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 ACTA2P62736 377 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 ACTG2P63267 376 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 STOML3Q8TAV4 291 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 SRPK3Q9UPE1 567 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 ENTPD2Q9Y5L3 495 aa19.07■□□□□ 0.64
CDC42BPB-201ENST00000361246 IGHV3-64DA0A0J9YX35 117 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms