RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 GP1BAP07359 652 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 PIPP12273 146 aaPredicted RBP12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 KHKP50053 298 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 RPS26P62854 115 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 STX4Q12846 297 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 LTB4RQ15722 352 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 SPANXN2Q5MJ10 180 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 STEAP3Q658P3 488 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 SLITRK4Q8IW52 837 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 PARP16Q8N5Y8 322 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 NUP43Q8NFH3 380 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 OR51Q1Q8NH59 317 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 KAT2AQ92830 837 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 MGLLQ99685 303 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 ANKRA2Q9H9E1 313 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 PARD6AQ9NPB6 346 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 PRTFDC1Q9NRG1 225 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 FAM86C1Q9NVL1 165 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 CRNNQ9UBG3 495 aaPredicted RBP12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 MAU2Q9Y6X3 613 aa12.25□□□□□ -0.45
SQSTM1-201ENST00000360718 OR2W5A6NFC9 320 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 PRAMEF25A6NGN4 478 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 D6RAR5 112 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 J3KTA2 159 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 CCRL2O00421 344 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 SNPHO15079 494 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 ZNF749O43361 778 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 OR10H2O60403 315 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 CTNSO60931 367 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 ATP1B1P05026 303 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 POU2F1P14859 743 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 NT5EP21589 574 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 ACP1P24666 158 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 SOX18P35713 384 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 PDX1P52945 283 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 CD300CQ08708 224 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 MED22Q15528 200 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 PLAG1Q6DJT9 500 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 HORMAD2Q8N7B1 307 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 HTRA1Q92743 480 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 TXNDC15Q96J42 360 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 RACGAP1Q9H0H5 632 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 PTGFRNQ9P2B2 879 aa12.24□□□□□ -0.45
SQSTM1-201ENST00000360718 PDE9AO76083 593 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 TIAF1O95411 115 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 OXSR1O95747 527 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 ADAP00813 363 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 HMGN2P05204 90 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 SLC35E2P0CK97 266 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 ETV6P41212 452 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 ERV3-1Q14264 604 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 LASP1Q14847 261 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 AKAP14Q86UN6 197 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 KRT73Q86Y46 540 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 DOK4Q8TEW6 326 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 ANKRD9Q96BM1 317 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 CEP19Q96LK0 163 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 OR6C1Q96RD1 312 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 EDEM2Q9BV94 578 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 NUAK2Q9H093 628 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 OR51I1Q9H343 314 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 ZNF304Q9HCX3 659 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 A4GALTQ9NPC4 353 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 SEMA4GQ9NTN9 838 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 RARRES3Q9UL19 164 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 A0A1B0GX78 115 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 TGFBR3LH3BV60 316 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 NME6O75414 186 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 CDC123O75794 336 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 GASTP01350 101 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 FBLP22087 321 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 CHMP24386 653 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 CSTF2P33240 577 aaKnown RBP eCLIP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 GRK5P34947 590 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 OR1D4P47884 311 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 LIMK1P53667 647 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 HSD17B7P56937 341 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 SMIM11AP58511 58 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 BIKQ13323 160 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 TRA2AQ13595 282 aaKnown RBP eCLIP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 GNA13Q14344 377 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 GANABQ14697 944 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 BCL2A1Q16548 175 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 MEDAGQ5VYS4 303 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 C19orf48Q6RUI8 117 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 KLHL17Q6TDP4 642 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 GDPGP1Q6ZNW5 385 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 SIMC1Q8NDZ2 872 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 WDR36Q8NI36 951 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 RAB8BQ92930 207 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 RBM18Q96H35 190 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 MS4A4EQ96PG1 132 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 TRNT1Q96Q11 434 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 CENPOQ9BU64 300 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 SERHL2Q9H4I8 314 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 NMNAT1Q9HAN9 279 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 SACM1LQ9NTJ5 587 aa12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 SIDT1Q9NXL6 827 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-201ENST00000360718 P2RX2Q9UBL9 471 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms