RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 LIPCP11150 499 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 RPL35P42766 123 aaKnown RBP17.34■□□□□ 0.37
SHANK1-202ENST00000359082 TCEAL1Q15170 157 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 CNIH2Q6PI25 160 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 ESX1Q8N693 406 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 LRRC15Q8TF66 581 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 HYLS1Q96M11 299 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 BMP4P12644 408 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 CX3CR1P49238 355 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 C3orf38Q5JPI3 329 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 BORCS6Q96GS4 357 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 PINK1Q9BXM7 581 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 ACAD8Q9UKU7 415 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 GMDSO60547 372 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 RDH16O75452 317 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 PTGER1P34995 402 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 PLCXD3Q63HM9 321 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 SLC12A9Q9BXP2 914 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 ACTR10Q9NZ32 417 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 E7ESA3 106 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 ALDOBP05062 364 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 UBL4AP11441 157 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 EVI2BP34910 448 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 CD79BP40259 229 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 P2RY2P41231 377 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF765Q7L2R6 523 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 OR7G2Q8NG99 324 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 GPN2Q9H9Y4 310 aaPredicted RBP17.34■□□□□ 0.37
SHANK1-202ENST00000359082 ENPP4Q9Y6X5 453 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 IFNA17P01571 189 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 RAB6AP20340 208 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 RAB31Q13636 194 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 NR0B2Q15466 257 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 NADSYN1Q6IA69 706 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 WDR53Q7Z5U6 358 aaPredicted RBP17.33■□□□□ 0.37
SHANK1-202ENST00000359082 WDSUB1Q8N9V3 476 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 GNB3P16520 340 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 IDH3GP51553 393 aaPredicted RBP17.33■□□□□ 0.37
SHANK1-202ENST00000359082 WNT4P56705 351 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 TAP2Q03519 686 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 LSAMPQ13449 338 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 ISCA2Q86U28 154 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 ZC3H3Q8IXZ2 948 aaKnown RBP17.33■□□□□ 0.37
SHANK1-202ENST00000359082 SH3BGRL2Q9UJC5 107 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 POLHQ9Y253 713 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 TP53TG5Q9Y2B4 290 aa17.33■□□□□ 0.37
SHANK1-202ENST00000359082 FUT1P19526 365 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 CHATP28329 748 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 HMGCLP35914 325 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 RAB41Q5JT25 222 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 VRTNQ9H8Y1 702 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 UNKLQ9H9P5 680 aaKnown RBP17.33■□□□□ 0.36
SHANK1-202ENST00000359082 DMRT3Q9NQL9 472 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 TESQ9UGI8 421 aaKnown RBP17.33■□□□□ 0.36
SHANK1-202ENST00000359082 RIMS3Q9UJD0 308 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 TTLL8A6PVC2 850 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 RAB3DO95716 219 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 DBHP09172 617 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 ETV4P43268 484 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 SELENOWP63302 87 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 TMEM201Q5SNT2 666 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 DUS1LQ6P1R4 473 aaKnown RBP17.33■□□□□ 0.36
SHANK1-202ENST00000359082 FIBINQ8TAL6 211 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 CHFRQ96EP1 664 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 SNX18Q96RF0 628 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 SMIM3Q9BZL3 60 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 A6NIZ1 184 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 PRICKLE3O43900 615 aaPredicted RBP17.33■□□□□ 0.36
SHANK1-202ENST00000359082 LPLP06858 475 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 RAP1BP61224 184 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 RAP1AP62834 184 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 NTHL1P78549 312 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 DPY19L2P1Q6NXN4 242 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 GPR155Q7Z3F1 870 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 PAPD5Q8NDF8 572 aaKnown RBP17.33■□□□□ 0.36
SHANK1-202ENST00000359082 PTERQ96BW5 349 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 CRB3Q9BUF7 120 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 RDH14Q9HBH5 336 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 THSD1Q9NS62 852 aa17.33■□□□□ 0.36
SHANK1-202ENST00000359082 CD300LBA8K4G0 201 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 NKX6-1P78426 367 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-202ENST00000359082 NFATC3Q12968 1075 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 DCST2Q5T1A1 773 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 IL17RDQ8NFM7 739 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 OR9A4Q8NGU2 314 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 PRDM9Q9NQV7 894 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 NUBP2Q9Y5Y2 271 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 EFCAB7A8K855 629 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 CENPBD1B2RD01 187 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 AKAIN1P0CW23 69 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 EEF1A1P68104 462 aaKnown RBP17.32■□□□□ 0.36
SHANK1-202ENST00000359082 LIPIQ6XZB0 460 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 TXNDC15Q96J42 360 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 ARSBP15848 533 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 ITGB8P26012 769 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 PPP5CP53041 499 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 ERVK-25P63136 954 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 PAGE3Q5JUK9 113 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 SLC39A5Q6ZMH5 540 aa17.32■□□□□ 0.36
SHANK1-202ENST00000359082 HORMAD2Q8N7B1 307 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms