RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 IGLV3-22A0A075B6J6 115 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 PMM2O15305 246 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 IL3RAP26951 378 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 CRHR1P34998 444 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 SGSHP51688 502 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 OR5I1Q13606 314 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 TMEM236Q5W0B7 351 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 IRF2BP1Q8IU81 584 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 HHATLQ9HCP6 504 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 KLHL21Q9UJP4 597 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 OIP5O43482 229 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 ZNF207O43670 478 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 PPP1R3DO95685 299 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 IL3P08700 152 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 CD9P21926 228 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 CSNK1A1P48729 337 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 IDH3AP50213 366 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 MRPS34P82930 218 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 FLI1Q01543 452 aaPredicted RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 GRM7Q14831 915 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 PTCHD3Q3KNS1 767 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 TIGD3Q6B0B8 471 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 YTHDF3Q7Z739 585 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 STON2Q8WXE9 905 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 IRGQQ8WZA9 623 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 NTMT1Q9BV86 223 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 FAIMQ9NVQ4 179 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 MYH13Q9UKX3 1938 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 SOBPA7XYQ1 873 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 CAPN5O15484 640 aaPredicted RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 SORBS2O94875 1100 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 OAS1P00973 400 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 PRPS1L1P21108 318 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 STK19P49842 368 aaPredicted RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 TAS2R43P59537 309 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 HIST2H3PS2Q5TEC6 136 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 ELP2Q6IA86 826 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 SLC22A25Q6T423 547 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 TMEM205Q6UW68 189 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 SSX7Q7RTT5 188 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 OR10G3Q8NGC4 313 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 RHBDF1Q96CC6 855 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 SGTBQ96EQ0 304 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 CCDC74BQ96LY2 380 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 ARHGAP39Q9C0H5 1083 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 TP63Q9H3D4 680 aaPredicted RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 RPF2Q9H7B2 306 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 NMNAT1Q9HAN9 279 aaPredicted RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 EMC9Q9Y3B6 208 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 NOTOA8MTQ0 251 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 MRPL33O75394 65 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 OMGP23515 440 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 RAC1P63000 192 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 TRAM2Q15035 370 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 FSTL4Q6MZW2 842 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 C22orf39Q6P5X5 142 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 SPNS3Q6ZMD2 512 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 DCUN1D3Q8IWE4 304 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 SGPP2Q8IWX5 399 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 DTD1Q8TEA8 209 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 FAM103A1Q9BTL3 118 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 RSRP1Q9BUV0 290 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 PATZ1Q9HBE1 687 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 MAB21L2Q9Y586 359 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 PRAMEF27A3QJZ7 478 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 LRRC30A6NM36 301 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 C17orf105B2RV13 164 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 SPDEFO95238 335 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 TXNDC12O95881 172 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 APOC3P02656 99 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 HLA-DQB2P05538 268 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 HNRNPFP52597 415 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 PPP5CP53041 499 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 SLC14A1Q13336 389 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 IER5LQ5T953 404 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 PRAMEF9Q5VWM5 478 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 NKAIN2Q5VXU1 208 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 GGNBP1Q5YKI7 109 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 TXNRD3NBQ6F5E7 133 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 TRMT10BQ6PF06 316 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 LRRC25Q8N386 305 aaPredicted RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 ADAM19Q9H013 955 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 DHX33Q9H6R0 707 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 HSPB11Q9Y547 144 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 FSCN2O14926 492 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 CA12O43570 354 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 ADAM23O75077 832 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 TBPP20226 339 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 SLC1A3P43003 542 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 TLE4Q04727 773 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 MAP4K2Q12851 820 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 TMEFF1Q8IYR6 380 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 CMTM3Q96MX0 182 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 ARL6Q9H0F7 186 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 FBXW11Q9UKB1 542 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 NOSIPQ9Y314 301 aaKnown RBP9.23□□□□□ -0.93
CHD3-202ENST00000358181 ZNF217O75362 1048 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 PTHP01270 115 aa9.23□□□□□ -0.93
CHD3-202ENST00000358181 H2AFB2P0C5Z0 115 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms