RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 GGT1P19440 569 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 RPS5P46782 204 aaKnown RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 ALDH3B2P48448 385 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 LILRA4P59901 499 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 RPS15AP62244 130 aaKnown RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 FLI1Q01543 452 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 GINS1Q14691 196 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 UPP1Q16831 310 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 DUOXA1Q1HG43 343 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF805Q5CZA5 627 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 FRG2Q64ET8 278 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 GOLGA7Q7Z5G4 137 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 CBR4Q8N4T8 237 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 ACBD4Q8NC06 268 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 MUL1Q969V5 352 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM230Q96A57 120 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 FRG2BQ96QU4 278 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 SLC22A4Q9H015 551 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 TCRBV9S1A1TA0A576 114 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 AQP7P3A6NL99 342 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 OR5K4A6NMS3 321 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 B4DXG7 233 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 I3L521 148 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 CAPN5O15484 640 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 IRAK2O43187 625 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 PPIHO43447 177 aaKnown RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 SCELO95171 688 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 CD48P09326 243 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 CD36P16671 472 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 ADH6P28332 368 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 RGRP47804 291 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 OR1D4P47884 311 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 INHBCP55103 352 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 CLDN17P56750 224 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 PCBP3P57721 371 aaKnown RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 TAS2R60P59551 318 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 UBE2IP63279 158 aaKnown RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 CNN3Q15417 329 aaKnown RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 ATP6AP1Q15904 470 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 GPRC6AQ5T6X5 926 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 LIPIQ6XZB0 460 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 GLB1L2Q8IW92 636 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 LINC00469Q8N7U9 141 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 SLC35G3Q8N808 338 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 FBXO17Q96EF6 278 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 UBL7Q96S82 380 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 TMEM165Q9HC07 324 aa5.49□□□□□ -1.53
BRCA1-203ENST00000357654 PTBP2Q9UKA9 531 aaKnown RBP5.49□□□□□ -1.53
BRCA1-203ENST00000357654 CDK12Q9NYV4 1490 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 HS3ST1O14792 307 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PPP1R3DO95685 299 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 HLA-DQB2P05538 268 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 C8BP07358 591 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 OR8U8P0C7N1 319 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 HNRNPA0Q13151 305 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 RAB35Q15286 201 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 RNF151Q2KHN1 245 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 NT5DC1Q5TFE4 455 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF529Q6P280 563 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 OGFOD3Q6PK18 319 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 UNC5DQ6UXZ4 953 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SHFQ7M4L6 423 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SIRT2Q8IXJ6 389 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 MKXQ8IYA7 352 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ZFP41Q8N8Y5 198 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 EDAQ92838 391 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SCAMP4Q969E2 229 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 MOAP1Q96BY2 351 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 F2RL3Q96RI0 385 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 HINT3Q9NQE9 182 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 B4GALT6Q9UBX8 382 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PPT2Q9UMR5 302 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PRAMEF27A3QJZ7 478 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 RDH16O75452 317 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 TNFSF15O95150 251 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 AMY2AP04746 511 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ITGB2P05107 769 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SERPINA6P08185 405 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 EN2P19622 333 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 CD6P30203 668 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 GSK3BP49841 420 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 ZNF33AQ06730 810 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SLC22A6Q4U2R8 563 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 UNC50Q53HI1 259 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 PRAMEF9Q5VWM5 478 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 AGTRAPQ6RW13 159 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 WFDC3Q8IUB2 231 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SFTPA2Q8IWL1 248 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SFTPA1Q8IWL2 248 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SIRT6Q8N6T7 355 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 TSEN2Q8NCE0 465 aaKnown RBP5.48□□□□□ -1.53
BRCA1-203ENST00000357654 OR5P2Q8WZ92 322 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SLC7A6Q92536 515 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SGK3Q96BR1 496 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 RHBDF1Q96CC6 855 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SMIM12Q96EX1 92 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 C20orf24Q9BUV8 137 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 SLC17A9Q9BYT1 436 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 EPHX3Q9H6B9 360 aa5.48□□□□□ -1.53
BRCA1-203ENST00000357654 LPAR2Q9HBW0 351 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms