RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 MEP1AQ16819 746 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 CYP51A1Q16850 503 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 IQCCQ4KMZ1 466 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ENPP6Q6UWR7 440 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PLXDC2Q6UX71 529 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SULF2Q8IWU5 870 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ULK2Q8IYT8 1036 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 HIPK4Q8NE63 616 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 DNAJB8Q8NHS0 232 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PAQR8Q8TEZ7 354 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 FIG4Q92562 907 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 DNAJA3Q96EY1 480 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SH3YL1Q96HL8 342 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 COL21A1Q96P44 957 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 IP6K3Q96PC2 410 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 TRNT1Q96Q11 434 aaKnown RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 UBL7Q96S82 380 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.68□□□□□ -1.826e-10■■■■□ 21.7
LIG4-201ENST00000356922 Q9N2J8 555 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 A4GALTQ9NPC4 353 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 WDR45Q9Y484 360 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ZGRF1Q86YA3 2104 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ELOVL7A1L3X0 281 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 OR6C70A6NIJ9 312 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 EVPLLA8MZ36 301 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 C5orf58C9J3I9 102 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ASNA1O43681 348 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SCO2O43819 266 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 KIAA0513O60268 411 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 COQ9O75208 318 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SLC25A12O75746 678 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 BCAS2O75934 225 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 SLITRK5O94991 958 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 DIRAS1O95057 198 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 KRT75O95678 551 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 IL11P20809 199 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 KDELR2P33947 212 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 DCTP40126 519 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 CYB561P49447 251 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 HLCSP50747 726 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SSR4P51571 173 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 RRADP55042 308 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PPP1R8Q12972 351 aaKnown RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 MFAP5Q13361 173 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 TOMM20Q15388 145 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 NPTX1Q15818 432 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 FLYWCH1Q4VC44 716 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 CRB2Q5IJ48 1285 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ABHD17BQ5VST6 288 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 GLYATQ6IB77 296 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ZCCHC12Q6PEW1 402 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 ARSKQ6UWY0 536 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 SLC34A3Q8N130 599 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 CYP4Z2PQ8N1L4 340 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 FBXW8Q8N3Y1 598 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 SLC5A8Q8N695 610 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 PSD4Q8NDX1 1056 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 OR5L2Q8NGL0 311 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 OR5M1Q8NGP8 315 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 MOAP1Q96BY2 351 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 HSPBAP1Q96EW2 488 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 REXO5Q96IC2 774 aaKnown RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 LRMDAQ9H2I8 198 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 TRIM45Q9H8W5 580 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 CTPS2Q9NRF8 586 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 MED11Q9P086 117 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 LHX6Q9UPM6 363 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 POMPQ9Y244 141 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 CARD8Q9Y2G2 431 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 L3MBTL1Q9Y468 752 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 GPC6Q9Y625 555 aaPredicted RBP3.68□□□□□ -1.82
LIG4-201ENST00000356922 HIVEP3Q5T1R4 2406 aa3.68□□□□□ -1.82
LIG4-201ENST00000356922 HRNRQ86YZ3 2850 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 OR5H15A6NDH6 313 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 LRRC3CA6NJW4 275 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 H0YC42 278 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 J3KTA2 159 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 AP3D1O14617 1153 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 PCDH17O14917 1159 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ARPC2O15144 300 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 STX11O75558 287 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 OPN1LWP04000 364 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 ITGB2P05107 769 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 IFI6P09912 130 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 UBTFL6P0CB48 400 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 HSD17B1P14061 328 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 GGT1P19440 569 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 CD247P20963 164 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 RPS4Y1P22090 263 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 EVI2BP34910 448 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 PGM1P36871 562 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 YAP1P46937 504 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 PNLIPRP2P54317 469 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 TPD52P55327 224 aaPredicted RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 EEF1A1P68104 462 aaKnown RBP3.67□□□□□ -1.82
LIG4-201ENST00000356922 LRRC74AQ0VAA2 488 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 C19orf57Q0VDD7 668 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 FADDQ13158 208 aa3.67□□□□□ -1.82
LIG4-201ENST00000356922 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms