RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 ITPAQ9BY32 194 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 LRRN3Q9H3W5 708 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 FOLH1BQ9HBA9 442 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 LIPT1Q9Y234 373 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 ZC3H12DA2A288 527 aaKnown RBP16.34■□□□□ 0.21
NPAS3-202ENST00000356141 ZAR1LA6NP61 321 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 HRO43593 1189 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 ENTPD1P49961 510 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 NUP107P57740 925 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 TOP3AQ13472 1001 aaPredicted RBP16.34■□□□□ 0.21
NPAS3-202ENST00000356141 DCTN2Q13561 401 aaKnown RBP16.34■□□□□ 0.21
NPAS3-202ENST00000356141 SNAPC1Q16533 368 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 ARHGAP11BQ3KRB8 267 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 POMZP3Q6PJE2 187 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 C16orf52Q8NHV5 167 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 ZDHHC12Q96GR4 267 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 ENKD1Q9H0I2 346 aa16.34■□□□□ 0.21
NPAS3-202ENST00000356141 MTHFD2LQ9H903 347 aaPredicted RBP16.34■□□□□ 0.21
NPAS3-202ENST00000356141 C17orf105B2RV13 164 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 TP53P04637 393 aaPredicted RBP16.33■□□□□ 0.21
NPAS3-202ENST00000356141 CCNA2P20248 432 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 DCKP27707 260 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 PLAURQ03405 335 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 WDR45BQ5MNZ6 344 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 PERM1Q5SV97 790 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 SLC16A12Q6ZSM3 486 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 SLC7A5P1Q8MH63 180 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 CAMKK1Q8N5S9 505 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 ELF4Q99607 663 aaPredicted RBP16.33■□□□□ 0.21
NPAS3-202ENST00000356141 CTRCQ99895 268 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 GTPBP2Q9BX10 602 aaKnown RBP16.33■□□□□ 0.21
NPAS3-202ENST00000356141 CLCA3PQ9Y6N3 262 aa16.33■□□□□ 0.21
NPAS3-202ENST00000356141 NFATC3Q12968 1075 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 TOMM20Q15388 145 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 NDUFA9Q16795 377 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 HEPHL1Q6MZM0 1159 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 BORAQ6PGQ7 559 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 SNX29P2Q8IUI4 249 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 EID2Q8N6I1 236 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 CDRT4Q8N9R6 151 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 OR4C3Q8NH37 302 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 WDR36Q8NI36 951 aaKnown RBP16.33■□□□□ 0.2
NPAS3-202ENST00000356141 DIO2Q92813 273 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 KLHDC3Q9BQ90 382 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 BTBD2Q9BX70 525 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 NDEL1Q9GZM8 345 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 TWSG1Q9GZX9 223 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 PSORS1C1Q9UIG5 152 aa16.33■□□□□ 0.2
NPAS3-202ENST00000356141 A0A1W2PRQ8 180 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 AGAP5A6NIR3 686 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CLCA1A8K7I4 914 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 J3QRK9 145 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ZNF749O43361 778 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 SERPINI2O75830 405 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ADAP00813 363 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 SLC35E2P0CK97 266 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CD36P16671 472 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 S1PR1P21453 382 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 GABRA4P48169 554 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ZNF619Q8N2I2 560 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 SMAP2Q8WU79 429 aaPredicted RBP16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CLDN23Q96B33 292 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 MED20Q9H944 212 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CTSFQ9UBX1 484 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 GMEB2Q9UKD1 530 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 MGAT4BQ9UQ53 548 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CLDN16Q9Y5I7 305 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CSNK1G3Q9Y6M4 447 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 HEATR5AQ86XA9 2040 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 DSPPQ9NZW4 1301 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 WWP2O00308 870 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CLDN4O14493 209 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 PLOD3O60568 738 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 SRPX2O60687 465 aaPredicted RBP16.32■□□□□ 0.2
NPAS3-202ENST00000356141 TMED10P49755 219 aaKnown RBP16.32■□□□□ 0.2
NPAS3-202ENST00000356141 GABARAPL2P60520 117 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ANKDD1AQ495B1 522 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 LANCL3Q6ZV70 420 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ERI1Q8IV48 349 aaKnown RBP16.32■□□□□ 0.2
NPAS3-202ENST00000356141 SLC34A3Q8N130 599 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 OR5M3Q8NGP4 307 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 OR51A7Q8NH64 312 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 LRR1Q96L50 414 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 LILRA5A6NI73 299 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 TIAF1O95411 115 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 GABRB1P18505 474 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 GRK5P34947 590 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CLK1P49759 484 aaKnown RBP16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ZNF136P52737 540 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ARFIP1P53367 373 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CAMK2BQ13554 666 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 GAB3Q8WWW8 586 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 SH3YL1Q96HL8 342 aaPredicted RBP16.32■□□□□ 0.2
NPAS3-202ENST00000356141 CNDP2Q96KP4 475 aaKnown RBP16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ARHGDIGQ99819 225 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ZNF350Q9GZX5 532 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ITGB1BP2Q9UKP3 347 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 ACAD8Q9UKU7 415 aa16.32■□□□□ 0.2
NPAS3-202ENST00000356141 TRAV27A0A087WT01 109 aa16.31■□□□□ 0.2
NPAS3-202ENST00000356141 SMIM30A4D0T7 59 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms