RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 CCL5P13501 91 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 LMO2P25791 158 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 RPL3P39023 403 aaKnown RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 DLX5P56178 289 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 PPIAP62937 165 aaKnown RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 ILF3Q12906 894 aaKnown RBP eCLIP14.75□□□□□ -0.05
RTN3-205ENST00000356000 ELFN2Q5R3F8 820 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 LHFPL3Q86UP9 236 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 NUDT13Q86X67 352 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 NAGSQ8N159 534 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 BOLLQ8N9W6 283 aaKnown RBP14.75□□□□□ -0.05
RTN3-205ENST00000356000 ZSCAN1Q8NBB4 408 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 CA5BP1Q8WTZ4 195 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 RNFT2Q96EX2 444 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 ACPTQ9BZG2 426 aa14.75□□□□□ -0.05
RTN3-205ENST00000356000 ZSWIM8A7E2V4 1837 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 H3BN98 237 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 CPSF4O95639 269 aaKnown RBP14.74□□□□□ -0.05
RTN3-205ENST00000356000 IL5P05113 134 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 MMP2P08253 660 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 ATXN1LP0C7T5 689 aaKnown RBP14.74□□□□□ -0.05
RTN3-205ENST00000356000 ACP2P11117 423 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 CELP19835 753 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 ACHEP22303 614 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 HTR2AP28223 471 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 RING1Q06587 406 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 AMHR2Q16671 573 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 EOGTQ5NDL2 527 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 DPPA2Q7Z7J5 298 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 THEM6Q8WUY1 208 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 GEMIN6Q8WXD5 167 aaKnown RBP14.74□□□□□ -0.05
RTN3-205ENST00000356000 KCTD13Q8WZ19 329 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 SLAMF9Q96A28 289 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 HS6ST2Q96MM7 605 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 SEC11CQ9BY50 192 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 CHRDQ9H2X0 955 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 KCNK12Q9HB15 430 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 GPN1Q9HCN4 374 aaPredicted RBP14.74□□□□□ -0.05
RTN3-205ENST00000356000 TVP23BQ9NYZ1 205 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 PISDQ9UG56 409 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 ENPP4Q9Y6X5 453 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 COL11A1P12107 1806 aaPredicted RBP14.74□□□□□ -0.05
RTN3-205ENST00000356000 NYNRINQ9P2P1 1898 aaKnown RBP14.74□□□□□ -0.05
RTN3-205ENST00000356000 B4GALT3O60512 393 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 IQCF3P0C7M6 154 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 ZNF35P13682 527 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 BDKRB2P30411 391 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 CSNK1EP49674 416 aaKnown RBP14.74□□□□□ -0.05
RTN3-205ENST00000356000 CCR9P51686 369 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 RGNQ15493 299 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 PTPRNQ16849 979 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 SLC29A4Q7RTT9 530 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 CD200R1Q8TD46 325 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 PIGKQ92643 395 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 FGF11Q92914 225 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 ZFP3Q96NJ6 502 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 TM6SF2Q9BZW4 377 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 TWSG1Q9GZX9 223 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 TOLLIPQ9H0E2 274 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 XKR8Q9H6D3 395 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 STOX2Q9P2F5 926 aaPredicted RBP14.74□□□□□ -0.05
RTN3-205ENST00000356000 DHRS7Q9Y394 339 aa14.74□□□□□ -0.05
RTN3-205ENST00000356000 PDCD11Q14690 1871 aaKnown RBP14.73□□□□□ -0.05
RTN3-205ENST00000356000 TMEM189-UBE2V1I3L0A0 370 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 DVL2O14641 736 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 PCDH7O60245 1069 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 C22orf31O95567 290 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 OR12D1P0DN82 309 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 CDH4P55283 916 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 CXADRP78310 365 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 ACSM1Q08AH1 577 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 OR2W3Q7Z3T1 314 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 CLECL1Q8IZS7 167 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 THEM5Q8N1Q8 247 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 ZNF383Q8NA42 475 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 ACOT11Q8WXI4 607 aaPredicted RBP14.73□□□□□ -0.05
RTN3-205ENST00000356000 MARS2Q96GW9 593 aaKnown RBP14.73□□□□□ -0.05
RTN3-205ENST00000356000 OR1F2PQ96R84 312 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 CRISPLD2Q9H0B8 497 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 ACSS1Q9NUB1 689 aaPredicted RBP14.73□□□□□ -0.05
RTN3-205ENST00000356000 ST3GAL5Q9UNP4 418 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 YJEFN3A6XGL0 299 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 BEST1O76090 585 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 SAGP10523 405 aaPredicted RBP14.73□□□□□ -0.05
RTN3-205ENST00000356000 GNSP15586 552 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 H2BFSP57053 126 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 SKP2Q13309 424 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 MFSD14CQ5VZR4 134 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 OSTF1Q92882 214 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 GPR20Q99678 358 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 OCSTAMPQ9BR26 566 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 DUSP15Q9H1R2 295 aaPredicted RBP14.73□□□□□ -0.05
RTN3-205ENST00000356000 HRASLSQ9HDD0 168 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 DZANK1Q9NVP4 752 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 C2orf42Q9NWW7 574 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 FLRT1Q9NZU1 646 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 RHCGQ9UBD6 479 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 CORO2BQ9UQ03 480 aa14.73□□□□□ -0.05
RTN3-205ENST00000356000 RALGAPA2Q2PPJ7 1873 aa14.72□□□□□ -0.05
RTN3-205ENST00000356000 IGKV6-21A0A0C4DH24 114 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms