RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TNFRSF13CQ96RJ3 184 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 USP28Q96RU2 1077 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 GPA33Q99795 319 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CHRDL1Q9BU40 450 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 NUP58Q9BVL2 599 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PAPOLGQ9BWT3 736 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SEMA4CQ9C0C4 833 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 NEUROG2Q9H2A3 272 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 DCTPP1Q9H773 170 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 VCPKMTQ9H867 229 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 HIF1ANQ9NWT6 349 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SUN2Q9UH99 717 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ADAM28Q9UKQ2 775 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PSME2Q9UL46 239 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PACSIN2Q9UNF0 486 aaPredicted RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 FBXO7Q9Y3I1 522 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 hCG_38984A0A1B0GV85 526 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PLSCR5A0PG75 271 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CST1P01037 141 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 NGFRP08138 427 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SERPINF2P08697 491 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 MBL2P11226 248 aaPredicted RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 FGF5P12034 268 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CEBPBP17676 345 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 DEKP35659 375 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 HMGCLP35914 325 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ATP5C1P36542 298 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 RPL4P36578 427 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 RIPK4P57078 832 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CARD18P57730 90 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 EIF3EP60228 445 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 HERVK_113P63132 956 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PPP1R7Q15435 360 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SLC5A12Q1EHB4 618 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ACSF3Q4G176 576 aaPredicted RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SLX4IPQ5VYV7 408 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 OR4F3Q6IEY1 312 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 FAM122CQ6P4D5 195 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 BHLHB9Q6PI77 547 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CCDC185Q8N715 623 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 KLHDC9Q8NEP7 349 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 OR51G2Q8NGK0 314 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 RAB3IL1Q8TBN0 382 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SSC4DQ8WTU2 575 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 GATAD1Q8WUU5 269 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 TM4SF19Q96DZ7 209 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 GIMAP5Q96F15 307 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 HMCESQ96FZ2 354 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 IL12RB2Q99665 862 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 DCTN5Q9BTE1 182 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 TRIM62Q9BVG3 475 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ERVK-6Q9BXR3 956 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 UBE2TQ9NPD8 197 aaPredicted RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 MBD2Q9UBB5 411 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 EIF3KQ9UBQ5 218 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PDE10AQ9Y233 779 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 MIA2Q96PC5 1412 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 DNAH1Q9P2D7 4330 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 HHLA1C9JL84 531 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SLC1A7O00341 560 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ARHGEF9O43307 516 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 IGSF6O95976 241 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PAHP00439 452 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 FCER2P06734 321 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 IDSP22304 550 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PTBP1P26599 531 aaKnown RBP eCLIP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 NMT1P30419 496 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 AXLP30530 894 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CCKBRP32239 447 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 VCPP55072 806 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 NANOS2P60321 138 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SRSF9Q13242 221 aaKnown RBP eCLIP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PEX6Q13608 980 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 HIKESHIQ53FT3 197 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 FAM120AOSQ5T036 256 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ARMC12Q5T9G4 340 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ASRGL1Q7L266 308 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ECHDC2Q86YB7 292 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 TBC1D10CQ8IV04 446 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 UBE2J2Q8N2K1 259 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 OR2L3Q8NG85 312 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 OR1K1Q8NGR3 316 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 TRMT10AQ8TBZ6 339 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 RDH11Q8TC12 318 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 RASD2Q96D21 266 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CAPNS2Q96L46 248 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CNOT6LQ96LI5 555 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 LRRC1Q9BTT6 524 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 TSSK1BQ9BXA7 367 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 C1QTNF4Q9BXJ3 329 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 POLR3FQ9H1D9 316 aaPredicted RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 LRRN3Q9H3W5 708 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ESM1Q9NQ30 184 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ECHDC1Q9NTX5 307 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 DCAF13Q9NV06 445 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PIPOXQ9P0Z9 390 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 RNF7Q9UBF6 113 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 MRPS7Q9Y2R9 242 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 POLDIP2Q9Y2S7 368 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 EXOSC1Q9Y3B2 195 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms