RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 OR56B1Q8NGI3 324 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 XYLT2Q9H1B5 865 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 A0A1B0GUH1 482 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 ARGFXA6NJG6 315 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 SEC14L6B5MCN3 397 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 PFKMP08237 780 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 PFKLP17858 780 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 IL1RNP18510 177 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 SSTR2P30874 369 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 FUT2Q10981 343 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 ANKK1Q8NFD2 765 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 GPX8Q8TED1 209 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 OVCA2Q8WZ82 227 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 GSRP00390 522 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 SOX3P41225 446 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 MRPL19P49406 292 aaKnown RBP11.95□□□□□ -0.5
COL6A3-203ENST00000353578 NKAIN3Q8N8D7 197 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 FBXO15Q8NCQ5 510 aaPredicted RBP11.95□□□□□ -0.5
COL6A3-203ENST00000353578 A0A0G2JLW4 131 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 SERPINA7P05543 415 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 CLCNKBP51801 687 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 TAF1CQ15572 869 aaPredicted RBP11.95□□□□□ -0.5
COL6A3-203ENST00000353578 IGSF11Q5DX21 431 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 B3GNT8Q7Z7M8 397 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 C11orf49Q9H6J7 331 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 SLC2A9Q9NRM0 540 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 PUS1Q9Y606 427 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL6A3-203ENST00000353578 UBE2Q2LH0YL09 131 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 SOCS5O75159 536 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 CSF2RAP15509 400 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 ZNF239Q16600 458 aaKnown RBP11.95□□□□□ -0.5
COL6A3-203ENST00000353578 POLMQ9NP87 494 aaPredicted RBP11.95□□□□□ -0.5
COL6A3-203ENST00000353578 FBXO10Q9UK96 956 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 FZD7O75084 574 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 CDC123O75794 336 aaPredicted RBP11.95□□□□□ -0.5
COL6A3-203ENST00000353578 GP1BBP13224 206 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 NDUFV1P49821 464 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 MRPL49Q13405 166 aaKnown RBP11.95□□□□□ -0.5
COL6A3-203ENST00000353578 NAA40Q86UY6 237 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 OR13D1Q8NGV5 346 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 KLHL42Q9P2K6 505 aa11.95□□□□□ -0.5
COL6A3-203ENST00000353578 TRIP12Q14669 1992 aaPredicted RBP11.95□□□□□ -0.5
COL6A3-203ENST00000353578 FAM221BA6H8Z2 402 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 CXorf49A8MYA2 514 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TMEM150CB9EJG8 249 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 MEIS2O14770 477 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SERPINE2P07093 398 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 CST2P09228 141 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SLBPQ14493 270 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 ATPAF1Q5TC12 328 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TEX261Q6UWH6 196 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SYNPRQ8TBG9 265 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 PRRG4Q9BZD6 226 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 ACKR4Q9NPB9 350 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 PARPBPQ9NWS1 579 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 U3KQ87 197 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 VSTM5A8MXK1 200 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TMEM233B4DJY2 109 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 UMAD1C9J7I0 102 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 MSTNO14793 375 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 DTYMKP23919 212 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SEMA3BQ13214 749 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 EXOSC6Q5RKV6 272 aaKnown RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SFRP4Q6FHJ7 346 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 ENPP6Q6UWR7 440 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 POLDIP3Q9BY77 421 aaKnown RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 CASTOR2A6NHX0 329 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TMEM212A6NML5 194 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 CYB5BO43169 146 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 CTRB1P17538 263 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 CCKARP32238 428 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 DAOAP59103 153 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 PKIAP61925 76 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SNRPGP62308 76 aaKnown RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 MANEALQ5VSG8 457 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 CTRB2Q6GPI1 263 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 OR1S1Q8NH92 325 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 ZNF566Q969W8 418 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TBC1D20Q96BZ9 403 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TNS2Q63HR2 1409 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SYN3O14994 580 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 BCKDHBP21953 392 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 MASP1P48740 699 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 POU6F2P78424 691 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 NHSL2Q5HYW2 709 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 OPN5Q6U736 354 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 FAM185AQ8N0U4 392 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 JOSD2Q8TAC2 188 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 LYSMD1Q96S90 227 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 GJE1A6NN92 205 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 ZBTB7AO95365 584 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 KIAA0907Q7Z7F0 614 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TMEM135Q86UB9 458 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 ZBTB44Q8NCP5 570 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 ABHD16BQ9H3Z7 469 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 SH3BGRL2Q9UJC5 107 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 DOCK11Q5JSL3 2073 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 TCRBP04435 133 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 MMP10P09238 476 aa11.94□□□□□ -0.5
COL6A3-203ENST00000353578 APOBEC3HQ6NTF7 200 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms