RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 HDHD5Q9BXW7 423 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 GPN2Q9H9Y4 310 aaPredicted RBP12.83□□□□□ -0.35
SMC6-201ENST00000351948 ARL6IP5O75915 188 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 GNAO1P09471 354 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 ZNF84P51523 738 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 ADAM8P78325 824 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 ALG10Q5BKT4 473 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 UBE2Q1Q7Z7E8 422 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 ZER1Q7Z7L7 766 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 OR8J2Q8NGG1 315 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 OR2I1PQ8NGU4 316 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 DUSP19Q8WTR2 217 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 LRRC3BQ96PB8 259 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 BTBD2Q9BX70 525 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 PTTG2Q9NZH5 202 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 SLC6A14Q9UN76 642 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 ACOT7O00154 380 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 SMAD9O15198 467 aaKnown RBP12.83□□□□□ -0.36
SMC6-201ENST00000351948 FOXD2O60548 495 aaPredicted RBP12.83□□□□□ -0.36
SMC6-201ENST00000351948 HPRP00739 348 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 OSMP13725 252 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 S1PR1P21453 382 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 RAB39AQ14964 217 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 IFI44Q8TCB0 444 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 MGLLQ99685 303 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 NUDT22Q9BRQ3 303 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 OR10A5Q9H207 317 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 SLC1A7O00341 560 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 CLUP10909 449 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 MTNR1AP48039 350 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 OLFML2AQ68BL7 652 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 ARHGAP11AQ6P4F7 1023 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 PODNL1Q6PEZ8 512 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 SYT13Q7L8C5 426 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 CHTF18Q8WVB6 975 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 RXFP3Q9NSD7 469 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 ZNF443Q9Y2A4 671 aaPredicted RBP12.83□□□□□ -0.36
SMC6-201ENST00000351948 CACNA1CQ13936 2221 aa12.83□□□□□ -0.36
SMC6-201ENST00000351948 TRBV5-4A0A0C4DH59 114 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 FAM172BPA6NC97 362 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 PPM1DO15297 605 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 ZNF208O43345 1280 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 HPS1Q92902 700 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 MS4A6EQ96DS6 147 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 ADAM29Q9UKF5 820 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 PPT2Q9UMR5 302 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 EXOSC1Q9Y3B2 195 aaKnown RBP12.82□□□□□ -0.36
SMC6-201ENST00000351948 TUBGCP6Q96RT7 1819 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 SULT2B1O00204 365 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 TMPRSS11DO60235 418 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 DHFRP00374 187 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 CD1CP29017 333 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 CPOXP36551 454 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 ADH7P40394 386 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 MESP2Q0VG99 397 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 HNRNPA0Q13151 305 aaKnown RBP12.82□□□□□ -0.36
SMC6-201ENST00000351948 TRMT12Q53H54 448 aaKnown RBP12.82□□□□□ -0.36
SMC6-201ENST00000351948 C22orf42Q6IC83 251 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 GPR137CQ8N3F9 429 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 TNFAIP8L1Q8WVP5 186 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 DDIT4LQ96D03 193 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 BPIFA2Q96DR5 249 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 SBK3P0C264 359 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 RPS5P46782 204 aaKnown RBP12.82□□□□□ -0.36
SMC6-201ENST00000351948 LIM2P55344 173 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 SQSTM1Q13501 440 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
SMC6-201ENST00000351948 SYNPOQ8N3V7 929 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 ACBD7Q8N6N7 88 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 ZNF548Q8NEK5 533 aaPredicted RBP12.82□□□□□ -0.36
SMC6-201ENST00000351948 DIABLOQ9NR28 239 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 UBQLN4Q9NRR5 601 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 ARFGEF1Q9Y6D6 1849 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 FAM186AA6NE01 2351 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 POLR2IP36954 125 aaKnown RBP12.82□□□□□ -0.36
SMC6-201ENST00000351948 PSD4Q8NDX1 1056 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 FSCN3Q9NQT6 498 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 VNN3Q9NY84 501 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 WSB2Q9NYS7 404 aaPredicted RBP12.82□□□□□ -0.36
SMC6-201ENST00000351948 TAS2R10Q9NYW0 307 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 PADI1Q9ULC6 663 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 AHCTF1Q8WYP5 2266 aa12.82□□□□□ -0.36
SMC6-201ENST00000351948 TRBV2A0A0J9YWF9 115 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 SHISA7A6NL88 538 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 CCRL2O00421 344 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 NDUFB2O95178 105 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 ETHE1O95571 254 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 TSPAN12O95859 305 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 CD160O95971 181 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 ARAFP10398 606 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 OR3A3P47888 321 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 OR3A2P47893 321 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 SPHARQ15513 63 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 RPL13AP3Q6NVV1 102 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 SLC48A1Q6P1K1 146 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 CBLL1Q75N03 491 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 CEACAM19Q7Z692 300 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 UEVLDQ8IX04 471 aa12.81□□□□□ -0.36
SMC6-201ENST00000351948 NAA11Q9BSU3 229 aaPredicted RBP12.81□□□□□ -0.36
SMC6-201ENST00000351948 SPNS1Q9H2V7 528 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms