RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 BBS1Q8NFJ9 593 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 OR10G6Q8NH81 332 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 ZFPM2Q8WW38 1151 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 MRPL38Q96DV4 380 aaKnown RBP20.59■□□□□ 0.89
UPF3A-201ENST00000351487 SAMD8Q96LT4 415 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 STACQ99469 402 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 UBQLN3Q9H347 655 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 RERGLQ9H628 205 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 IL21RQ9HBE5 538 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 HINT3Q9NQE9 182 aaKnown RBP20.59■□□□□ 0.89
UPF3A-201ENST00000351487 SEC14L5O43304 696 aa20.58■□□□□ 0.89
UPF3A-201ENST00000351487 HTR2AP28223 471 aa20.58■□□□□ 0.89
UPF3A-201ENST00000351487 MAPK14Q16539 360 aa20.58■□□□□ 0.89
UPF3A-201ENST00000351487 ZCCHC12Q6PEW1 402 aa20.58■□□□□ 0.89
UPF3A-201ENST00000351487 FAM131AQ6UXB0 335 aa20.58■□□□□ 0.89
UPF3A-201ENST00000351487 RNF113BQ8IZP6 322 aaKnown RBP20.58■□□□□ 0.89
UPF3A-201ENST00000351487 CDRT4Q8N9R6 151 aa20.58■□□□□ 0.89
UPF3A-201ENST00000351487 ADAP2Q9NPF8 381 aa20.58■□□□□ 0.89
UPF3A-201ENST00000351487 MRPS2Q9Y399 296 aaKnown RBP20.58■□□□□ 0.89
UPF3A-201ENST00000351487 CSNK1G3Q9Y6M4 447 aa20.58■□□□□ 0.89
UPF3A-201ENST00000351487 A0A1W2PQ09 198 aa20.58■□□□□ 0.88
UPF3A-201ENST00000351487 J3QRE1 110 aa20.58■□□□□ 0.88
UPF3A-201ENST00000351487 EIF2S1P05198 315 aaKnown RBP20.58■□□□□ 0.88
UPF3A-201ENST00000351487 ZGLP1P0C6A0 271 aa20.58■□□□□ 0.88
UPF3A-201ENST00000351487 UBQLNLQ8IYU4 475 aa20.58■□□□□ 0.88
UPF3A-201ENST00000351487 ZFP41Q8N8Y5 198 aa20.58■□□□□ 0.88
UPF3A-201ENST00000351487 GDPD1Q8N9F7 314 aa20.58■□□□□ 0.88
UPF3A-201ENST00000351487 RERGQ96A58 199 aaPredicted RBP20.58■□□□□ 0.88
UPF3A-201ENST00000351487 NKX2-4Q9H2Z4 354 aa20.58■□□□□ 0.88
UPF3A-201ENST00000351487 COL4A2P08572 1712 aa20.58■□□□□ 0.88
UPF3A-201ENST00000351487 ZNF860A6NHJ4 632 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 H0YGG7 62 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 FGF17O60258 216 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 FMO6PO60774 539 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 SLC2A10O95528 541 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 OR2B6P58173 313 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 ARF3P61204 181 aaPredicted RBP20.57■□□□□ 0.88
UPF3A-201ENST00000351487 ID2Q02363 134 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 SCN1BQ07699 218 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 ASAH1Q13510 395 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 MRPL2Q5T653 305 aaKnown RBP20.57■□□□□ 0.88
UPF3A-201ENST00000351487 GID4Q8IVV7 300 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 FAM3CQ92520 227 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 DIRAS2Q96HU8 199 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 S1PR5Q9H228 398 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 OR52D1Q9H346 318 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 FN3KQ9H479 309 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 ENTPD2Q9Y5L3 495 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 SPACA6W5XKT8 324 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 CDHR4A6H8M9 788 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 FABP12A6NFH5 140 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 UNC119BA6NIH7 251 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 LYPD3O95274 346 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 HLA-DPB1P04440 258 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 PRG2P13727 222 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 MAP3K8P41279 467 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 HTR3AP46098 478 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 FXYD6P3P58550 94 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 YPEL5P62699 121 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 WDR88Q6ZMY6 472 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 RNF44Q7L0R7 432 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 CXXC5Q7LFL8 322 aaKnown RBP20.57■□□□□ 0.88
UPF3A-201ENST00000351487 TRIM48Q8IWZ4 208 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 SCAIQ8N9R8 606 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 BAHD1Q8TBE0 780 aaPredicted RBP20.57■□□□□ 0.88
UPF3A-201ENST00000351487 HOXD1Q9GZZ0 328 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 TIGARQ9NQ88 270 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 EVA1BQ9NVM1 165 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 IL20RAQ9UHF4 553 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 KCNE5Q9UJ90 142 aa20.57■□□□□ 0.88
UPF3A-201ENST00000351487 MYO9BQ13459 2157 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 FAM221BA6H8Z2 402 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 LRRC72A6NJI9 287 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 CYR61O00622 381 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 LDB3O75112 727 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 AK1P00568 194 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 FZD5Q13467 585 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 MANEAQ5SRI9 462 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 ZNF544Q6NX49 715 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 PRSS41Q7RTY9 318 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 CPOQ8IVL8 374 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 COX18Q8N8Q8 333 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 FANK1Q8TC84 345 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 PMM1Q92871 262 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 NEDD4LQ96PU5 975 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 SECISBP2Q96T21 854 aaKnown RBP20.56■□□□□ 0.88
UPF3A-201ENST00000351487 ASB6Q9NWX5 421 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 SIDT1Q9NXL6 827 aaKnown RBP20.56■□□□□ 0.88
UPF3A-201ENST00000351487 H2AFY2Q9P0M6 372 aaPredicted RBP20.56■□□□□ 0.88
UPF3A-201ENST00000351487 TNFRSF10DQ9UBN6 386 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 POLHQ9Y253 713 aa20.56■□□□□ 0.88
UPF3A-201ENST00000351487 C2orf74A8MZ97 194 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 SOCS6O14544 535 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 POLR1CO15160 346 aaPredicted RBP20.55■□□□□ 0.88
UPF3A-201ENST00000351487 GPR75O95800 540 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 GALP22466 123 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 BDH1Q02338 343 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 OR1Q1Q15612 314 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 PRICKLE4Q2TBC4 344 aa20.55■□□□□ 0.88
UPF3A-201ENST00000351487 ZNF791Q3KP31 576 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms